Transcript Information: S_Transcript_16802.p1


Annotated TAIR IDAT5G57660.1
Annotated Gene NameCONSTANS-like 5
Annotated Gene Symbol(s)ATCOL5, COL5
Annotation TypeHomolog
Chromosome Positionchr5:23355573-23356729 | Forward length=355
E-Value2E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.459372424558
Replicate 225.844982053089
Replicate 331.147732052303
Condition 2: 8 Hour
Replicate 13.3849825900211
Replicate 22.8408696685367
Replicate 31.8947420093317
Condition 3: 24 Hour
Replicate 123.994697421415
Replicate 222.951606009063
Replicate 324.981834458401


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16802.p1 GENE.S_Transcript_16802~~S_Transcript_16802.p1 ORF type:complete len:315 (+),score=8.19,zf-B_box|PF00643.20|0.0023,zf-B_box|PF00643.20|1.9e-06,zf-B_box|PF00643.20|5.6e+03 S_Transcript_16802:120-1064(+)
ATGGTGACACTAGATGAGGAAAACTTCAAGGGCTTGCTAGGCCTAGCGGCCCGGCCATGCGACACGTGCTGCACGGCTGCGGCCTTGTTGTACTGCAAGGTTGACGCCGCGTTCCTGTGCGGCGCCTGCGACTCGAAGCTCCACCGCCACCTGTGCCACGAGCGCGTGTGGATCTGCGAGGTGTGCGAGCAGGCGCCGGCTGCAGTGACTTGCAAAGCGGACGCAGCTGTTCTGTGCACGGCCTGCGACCACGACATCCACTCTGCCAACCCCCTCGCACGCCGCCACGAGCGGGTCCCGGTGGTCCCGTTTCTTGACTCTGCCGACGACGCGGCCGTCGTCCGCTCCTCCTCCACCGCTGCCCCTGCAGCTGCCACCTCGTTACTAATCTCCGACGACCTGGCTGCGGTTCCGGCTCCGATCGCTCCGGCTTTGCTGCGTGGCGGCGATGGCGATGAAGACGAGATTGACGCTGAGACGTGGCTCATTCCTAACCCTAGCTTCTTGTATAGTAATGACTCTGACTTGCTTCACCACCATTTCGGACCTCCTTCTCTTAGCTCCTCTCTCAACAACCTCAACCACAATTCTCAACAAGAACAGCAACACAAGATGAACATTCAACAGCAACACAAGATGAAAATTCAACAACAACAACAACACAAGATAAACATTCAACAACAACAACACAAGATGAACATTCAACAACAGAGTGCGAGTTTTGCGTTTACCGACAGTGTTGTGCCGTCACAATCAAACGGGAACTTGAGCTTCTCAAACGACGTGACTCATTCCTTCCAAAATTGCTTCGACATCGACTTCTCTCAGCCTCACAAGCACCACAACAAGATCATCTCCACCTTCACTAATTACTCCTCTCCACACAGCGTAAGTACTTCACCTTCATCAATCCAATCGAACCAAATCAAAATCAATTACAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16802.p1 GENE.S_Transcript_16802~~S_Transcript_16802.p1 ORF type:complete len:315 (+),score=8.19,zf-B_box|PF00643.20|0.0023,zf-B_box|PF00643.20|1.9e-06,zf-B_box|PF00643.20|5.6e+03 S_Transcript_16802:120-1064(+)
MVTLDEENFKGLLGLAARPCDTCCTAAALLYCKVDAAFLCGACDSKLHRHLCHERVWICEVCEQAPAAVTCKADAAVLCTACDHDIHSANPLARRHERVPVVPFLDSADDAAVVRSSSTAAPAAATSLLISDDLAAVPAPIAPALLRGGDGDEDEIDAETWLIPNPSFLYSNDSDLLHHHFGPPSLSSSLNNLNHNSQQEQQHKMNIQQQHKMKIQQQQQHKINIQQQQHKMNIQQQSASFAFTDSVVPSQSNGNLSFSNDVTHSFQNCFDIDFSQPHKHHNKIISTFTNYSSPHSVSTSPSSIQSNQIKINYN*

Click here to download the sequence:
Link to NCBI Protein BLAST