Transcript Information: S_Transcript_168023.p1


Annotated TAIR IDAT1G48100.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17766921-17769625 | Forward length=475
E-Value2.1E-240
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0791902255581
Replicate 22.6438880048262
Replicate 30.99072549209424
Condition 2: 8 Hour
Replicate 11.630246780442
Replicate 20.60089676098439
Replicate 32.3341733947604
Condition 3: 24 Hour
Replicate 10.49647462478623
Replicate 21.26430353835
Replicate 31.6675731838093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_168023.p1 GENE.S_Transcript_168023~~S_Transcript_168023.p1 ORF type:complete len:484 (+),score=58.64,Glyco_hydro_28|PF00295.13|4.1e-86,Pectate_lyase_3|PF12708.3|3.9e-08,Pectate_lyase_3|PF12708.3|0.58 S_Transcript_168023:569-2020(+)
ATGAGGCAATATTCTTACTTTGTTACACTAGTTTTATTAGTTTCAATTATTCTTGGTTCACAAAATGTTGGTAAATTAGTTGAAGGAAGAGCTCATTTCCACAAGAAAAAAGGGAGTTCCCCTGCTTATAGCCATGCTCCTAGAGGTGATGATCAAGACCAACAACCTTCATATAGCCCTGTTCCTTCCTCTCCCTCTACTGTCCCCTCCAGCCCGTACCCGTACCCGTACCCGAGCCCGGCCCAGGATGGGCCCTGCATTTTCGACGTCACCACCTTTGGGGCCGTCGGAGATGGAACTGCCGACGACACCCCAGCCTTCAAGGCTGCCTGGAAGGCAGCCTGTGCGGTGGAGTCCGGTGTCATATTGGTCCCTTCTACAGGGAAGTTCATGATCACCTCTACCATATTTTCTGGGCCGTGTAAGCCTGGACTTGTGCTCCAGGTGGATGGAATCCTAATGCCACCGGACGGGCCGGAATGCTGGCCGGAATCAGACAGCAAGAACCAATGGCTAGTATTCTACAGGCTAGATGGAATGACACTAAACGGAACAGGAACAATTGAAGGCAATGGTCAGAAATGGTGGGAGCTTCCTTGTAAACCTCACAGGGGTCCACATGGATCAACATTGCCCGGCCCATGTGACAGCCCTGCGATGATTAGGTTCTTCATGAGCAACAACTTGAAAGTAAGTGGGGTAAGAATACAAAACAGTCCTCAATTTCACATGAAGTTTGATGGGTGTGAAGAGGTGTTGATAGAAAAATTACAAATCAATTCACCTCAATACAGCCCCAACACAGATGGCATTCATGTGGGGAATTCTAAGGGTGTTCGCATCTACAATTCTATGATTGCTAATGGAGATGATTGCATTTCAATAGGACCAGGTTCCTCAGATGTGGATATACAGGGGGTGGTGTGCGACCACAGTCACGGGATCAGCATTGGGAGTCTAGGAGTCCACAACACACAAGCATGTGTATCAAACATATCAGTCCGGGGCGCCTTCATAAAGAACTCAGACAATGGGGTGAGGATCAAGACATGGCAAGGTGGCTCAGTCTCAGTCTCAAACATACTATTTGAAGACATACAAATGGAGAACACAACCAACTGCATAATGATAGACCAGTATTACTGCCTCTCCAAGGCCTGCATGAACGAAACCTCGGCCGTCTACCTCTCAGGAGTGACCTACAGAAACATTAAGGGCACTTACAACAATGTAAGAAGTGCCCCTATTCACTTTGCTTGTAGTGACACTGTCCCTTGCACAAACATAACCATGTCAGAAGTTGAACTTTTGCCCTCTCAAGGAGTTCTTGTGGACAACCCCTTTTGTTGGAATACTTATGGTATTCAAGAGACCTTGACTATTCCTCCTATTGATTGCTTCCTTGATGGTATTCCTCAGTCTCTTGGTGAGGTTCTTTCTAGTTGTTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_168023.p1 GENE.S_Transcript_168023~~S_Transcript_168023.p1 ORF type:complete len:484 (+),score=58.64,Glyco_hydro_28|PF00295.13|4.1e-86,Pectate_lyase_3|PF12708.3|3.9e-08,Pectate_lyase_3|PF12708.3|0.58 S_Transcript_168023:569-2020(+)
MRQYSYFVTLVLLVSIILGSQNVGKLVEGRAHFHKKKGSSPAYSHAPRGDDQDQQPSYSPVPSSPSTVPSSPYPYPYPSPAQDGPCIFDVTTFGAVGDGTADDTPAFKAAWKAACAVESGVILVPSTGKFMITSTIFSGPCKPGLVLQVDGILMPPDGPECWPESDSKNQWLVFYRLDGMTLNGTGTIEGNGQKWWELPCKPHRGPHGSTLPGPCDSPAMIRFFMSNNLKVSGVRIQNSPQFHMKFDGCEEVLIEKLQINSPQYSPNTDGIHVGNSKGVRIYNSMIANGDDCISIGPGSSDVDIQGVVCDHSHGISIGSLGVHNTQACVSNISVRGAFIKNSDNGVRIKTWQGGSVSVSNILFEDIQMENTTNCIMIDQYYCLSKACMNETSAVYLSGVTYRNIKGTYNNVRSAPIHFACSDTVPCTNITMSEVELLPSQGVLVDNPFCWNTYGIQETLTIPPIDCFLDGIPQSLGEVLSSCS*

Click here to download the sequence:
Link to NCBI Protein BLAST