Transcript Information: S_Transcript_168026.p1


Annotated TAIR IDAT1G48100.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:17766921-17769625 | Forward length=475
E-Value1E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1351517114532
Replicate 21.2547558042189
Replicate 30.61184432504836
Condition 2: 8 Hour
Replicate 10.40427280222053
Replicate 20
Replicate 31.1112527187431
Condition 3: 24 Hour
Replicate 10.62118152105955
Replicate 20.53705714635894
Replicate 31.7930363321173


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_168026.p1 GENE.S_Transcript_168026~~S_Transcript_168026.p1 ORF type:complete len:211 (+),score=18.40,Glyco_hydro_28|PF00295.13|3e-09,Pectate_lyase_3|PF12708.3|4.9e-09 S_Transcript_168026:811-1443(+)
ATGAGGCAATATTCTTACTTTGTTACACTAGTTTTATTAGTTTCAATTATTCTTGGTTCACAAAATGTTGGTAAATTAGTTGAAGGAAGAGCTCATTTCCACAAGAAAAAAGGGAGTTCCCCTGCTTATAGCCCTGTTCCTTCCTCTCCCTCTACTGCCCCCTCCACCCCGTACCCGAGCCCGGCCCAGGATGGGCCCTGCATTTTCGACGTCACCACCTTTGGGGCCGTCGGAGATGGAACTGCCGACGACACCCCAGCCTTCAAGGCTGCCTGGAAGGCAGCCTGTGCGGTGGAGTCCGGTGTCATATTGGTCCCTTCTACAGGGAAGTTCATGATCACCTCTACCATATTTTCCGGGCCATGTAAGTCCGGACTCGTGCTCCAGGTGGATGGAATCCTAATGCCACCGGACGGGCCGGAATGCTGGCCGGAATCAGACAGCAAGAACCAATGGCTAGTATTCTACAGGCTAGATGGAATGACACTAAACGGAACAGGAACAATTGAAGGCAATGGTCAGAAATGGTGGGAGCTTCCTTGTAAACCTCACAGGGGTCCACATGGATCAACATTGCCCGGCCCATGTGACAGCCCTGCGGTAAAGTTATACTCATATATATTTATATTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_168026.p1 GENE.S_Transcript_168026~~S_Transcript_168026.p1 ORF type:complete len:211 (+),score=18.40,Glyco_hydro_28|PF00295.13|3e-09,Pectate_lyase_3|PF12708.3|4.9e-09 S_Transcript_168026:811-1443(+)
MRQYSYFVTLVLLVSIILGSQNVGKLVEGRAHFHKKKGSSPAYSPVPSSPSTAPSTPYPSPAQDGPCIFDVTTFGAVGDGTADDTPAFKAAWKAACAVESGVILVPSTGKFMITSTIFSGPCKSGLVLQVDGILMPPDGPECWPESDSKNQWLVFYRLDGMTLNGTGTIEGNGQKWWELPCKPHRGPHGSTLPGPCDSPAVKLYSYIFIL*

Click here to download the sequence:
Link to NCBI Protein BLAST