Transcript Information: S_Transcript_16803.p1


Annotated TAIR IDAT5G57660.1
Annotated Gene NameCONSTANS-like 5
Annotated Gene Symbol(s)ATCOL5, COL5
Annotation TypeHomolog
Chromosome Positionchr5:23355573-23356729 | Forward length=355
E-Value3E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1217.23339764219
Replicate 2200.09577802043
Replicate 3197.3549246458
Condition 2: 8 Hour
Replicate 116.733799100525
Replicate 217.12677407826
Replicate 313.972589099916
Condition 3: 24 Hour
Replicate 1153.64583124963
Replicate 2154.58020766547
Replicate 3160.8056180374


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16803.p1 GENE.S_Transcript_16803~~S_Transcript_16803.p1 ORF type:complete len:418 (+),score=-4.86,CCT|PF06203.10|7e-18,zf-B_box|PF00643.20|0.0083,zf-B_box|PF00643.20|2.9e-06,zf-B_box|PF00643.20|7.8e+03 S_Transcript_16803:120-1373(+)
ATGGTGACACTAGATGAGGAAAACTTCAAGGGCTTGCTAGGCCTAGCGGCCCGGCCATGCGACACGTGCTGCACGGCTGCGGCCTTGTTGTACTGCAAGGTTGACGCCGCGTTCCTGTGCGGCGCCTGCGACTCGAAGCTCCACCGCCACCTGTGCCACGAGCGCGTGTGGATCTGCGAGGTGTGCGAGCAGGCGCCGGCTGCAGTGACTTGCAAAGCGGACGCAGCTGTTCTGTGCACGGCCTGCGACCACGACATCCACTCTGCCAACCCCCTCGCACGCCGCCACGAGCGGGTCCCGGTGGTCCCGTTTCTTGACTCTGCCGACGACGCGGCCGTCGTCCGCTCCTCCTCCACCGCTGCCCCTGCAGCTGCCACCTCGTTACTAATCTCCGACGACCTGGCTGCGGTTCCGGCTCCGATCGCTCCGGCTTTGCTGCGTGGCGGCGATGGCGATGAAGACGAGATTGACGCTGAGACGTGGCTCATTCCTAACCCTAGCTTCTTGTATAGTAATGACTCTGACTTGCTTCACCACCATTTCGGACCTCCTTCTCTTAGCTCCTCTCTCAACAACCTCAACCACAATTCTCAACAAGAACAGCAACACAAGATGAACATTCAACAGCAACACAAGATGAAAATTCAACAACAACAACAACACAAGATAAACATTCAACAACAACAACACAAGATGAACATTCAACAACAGAGTGCGAGTTTTGCGTTTACCGACAGTGTTGTGCCGTCACAATCAAACGGGAACTTGAGCTTCTCAAACGACGTGACTCATTCCTTCCAAAATTGCTTCGACATCGACTTCTCTCAGCCTCACAAGCACCACAACAAGATCATCTCCGCCTTCAATAATTACTCCTCTCCACTCAGCGTTTCATCGTCGGATATTGGAGTAGTACCAGACGGAAACGCGAACTCGATGTCGGAGGTCTCATACACGTTCGCGAAGTCAACAACTACCGGAGACGGCGGCTCGTCGACGAATACCGGATCTCCGGCGCCGGTGATAGACCGGGAGGCCAGGGTTTTGAGGTACAGAGAGAAAAGGAAGAACCGGAAATTCGAGAAAACAATTAGGTACGCTTCCAGAAAGGCTTACGCTGAAACAAGGCCCAGAATTAAAGGCCGTTTCGCCAAACGTACCGAAACCAACGACGTCGTTTCGGAGATCGATCAGATTTACGGGGCCGGGTTCGGGCTTGATCACGGCGGGTACGGCGTCGTTCCGTCCTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16803.p1 GENE.S_Transcript_16803~~S_Transcript_16803.p1 ORF type:complete len:418 (+),score=-4.86,CCT|PF06203.10|7e-18,zf-B_box|PF00643.20|0.0083,zf-B_box|PF00643.20|2.9e-06,zf-B_box|PF00643.20|7.8e+03 S_Transcript_16803:120-1373(+)
MVTLDEENFKGLLGLAARPCDTCCTAAALLYCKVDAAFLCGACDSKLHRHLCHERVWICEVCEQAPAAVTCKADAAVLCTACDHDIHSANPLARRHERVPVVPFLDSADDAAVVRSSSTAAPAAATSLLISDDLAAVPAPIAPALLRGGDGDEDEIDAETWLIPNPSFLYSNDSDLLHHHFGPPSLSSSLNNLNHNSQQEQQHKMNIQQQHKMKIQQQQQHKINIQQQQHKMNIQQQSASFAFTDSVVPSQSNGNLSFSNDVTHSFQNCFDIDFSQPHKHHNKIISAFNNYSSPLSVSSSDIGVVPDGNANSMSEVSYTFAKSTTTGDGGSSTNTGSPAPVIDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTETNDVVSEIDQIYGAGFGLDHGGYGVVPSF*

Click here to download the sequence:
Link to NCBI Protein BLAST