Transcript Information: S_Transcript_16804.p1


Annotated TAIR IDAT5G57660.1
Annotated Gene NameCONSTANS-like 5
Annotated Gene Symbol(s)ATCOL5, COL5
Annotation TypeHomolog
Chromosome Positionchr5:23355573-23356729 | Forward length=355
E-Value5E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.875277973608
Replicate 228.603142193142
Replicate 325.586562708869
Condition 2: 8 Hour
Replicate 12.1072520076218
Replicate 20.88426279208406
Replicate 31.2637854311254
Condition 3: 24 Hour
Replicate 123.830781989739
Replicate 223.559614405452
Replicate 324.524201279283


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16804.p1 GENE.S_Transcript_16804~~S_Transcript_16804.p1 ORF type:3prime_partial len:253 (+),score=6.16,zf-B_box|PF00643.20|0.013,zf-B_box|PF00643.20|2e-06 S_Transcript_16804:141-896(+)
ATGGAGACACTATATGAGGAAAACTTCAAGGGCTTGCTAGGCCTAGCGGCCCGGCCGTGCGACACGTGCTGCGCGGCTGCAGCCTCGCTGTACTGGAAGGTTGACGCGGCGTTCCTGTGCGGCGCCTGTGACTTGAAGCTCCACCGCCATGCGCGCCACGAGCGTGTGTGGATGTGCGAGGTGTGCGAGCAGGCGCCGGCTGCAGTGACTTGCAAAGCGGACGCAGCTGTTCTGTGCACGGCCTGCGACCACGACATCCACTCTGCCAACCCCCTCGCACGCCGCCACGAGCGGGTCCCAGTGGTCCCGTTCATCGACTCTGCCGACGATGCGGCCGTCGTCCGCTCCTCCACCGCTGCCCCTGCAGTCGCCACGTCGCTACTAATCTCCGACGACCTGGCTGCCGTCCCAGCTCCGATCGCTCCGGCTTTGCTCTGTGGCGGCGATAACGATGAGATTGACGCTGAGATGTGGCTCATTCCTAACCCTAGCTTCTTGTATAGTAATGACTCTGACTTGCTTCACCACCATTTCGGACCTCCTTCTCTTAGCTCCTCTCTCAACAACCTCAACCACAATTCTCAACAAGAACAGCAACACAAGATGAACATTCAACAGCAACACAAGATGAAAATTCAACAACAACAACAACACAAGATAAACATTCAACAACAACAACACAAGATGAACATTCAACAACAGAGTGCGAGTTTTGCGTTTACCGACAGTGTTGTGCCGTCACAATCAAACGGGAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16804.p1 GENE.S_Transcript_16804~~S_Transcript_16804.p1 ORF type:3prime_partial len:253 (+),score=6.16,zf-B_box|PF00643.20|0.013,zf-B_box|PF00643.20|2e-06 S_Transcript_16804:141-896(+)
METLYEENFKGLLGLAARPCDTCCAAAASLYWKVDAAFLCGACDLKLHRHARHERVWMCEVCEQAPAAVTCKADAAVLCTACDHDIHSANPLARRHERVPVVPFIDSADDAAVVRSSTAAPAVATSLLISDDLAAVPAPIAPALLCGGDNDEIDAEMWLIPNPSFLYSNDSDLLHHHFGPPSLSSSLNNLNHNSQQEQQHKMNIQQQHKMKIQQQQQHKINIQQQQHKMNIQQQSASFAFTDSVVPSQSNGN

Click here to download the sequence:
Link to NCBI Protein BLAST