Transcript Information: S_Transcript_168379.p1


Annotated TAIR IDAT1G12760.1
Annotated Gene NameZinc finger, C3HC4 type (RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4348728-4350512 | Forward length=408
E-Value1.8E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 168.018180341372
Replicate 279.14758001458
Replicate 379.500726418628
Condition 2: 8 Hour
Replicate 188.717764571762
Replicate 286.663763177193
Replicate 388.62632754207
Condition 3: 24 Hour
Replicate 190.61384923647
Replicate 284.714247154308
Replicate 381.17580310967


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_168379.p1 GENE.S_Transcript_168379~~S_Transcript_168379.p1 ORF type:complete len:412 (+),score=50.62,zf-RING_2|PF13639.2|9.4e+03,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|2.1e-13,zf-RING_11|PF17123.1|2.7e-09,zf-C3HC4|PF00097.21|1.4e+04,zf-C3HC4|PF00097.21|4.3e-07,zf-rbx1|PF12678.3|2.1e-05 S_Transcript_168379:180-1415(+)
ATGTCCACCACCCCTCAATATGTCGAAACCAATTCCACGACCCCATTACTAAGCCCAACCGAATCCTCAACAGGAGACCGATCATTCCGGTCACGAAGCCGGAGATTCTCCAGGAGAGCCGGTCTCATGGGAGCGGCGAGGTTTCTCCGGCGAGCGAACAGTCGAGGAGGTGGCATGATGACGGAACAATCGGTTAGGGTTAGAGAAGTTGCAGCTCAACAAATCGAAGAAAGGCAAAGCGATTGGGCTTATTCTACTCCGATTGTCGTTCTTGATTTGCTTTGGAACACGATTTTCGTTTTGGTTGCTATCGTAATGTTGATTTTGAGCAGAGATGAAACGACATCGGTTCCTTTAAGGTTATGGCTTGTTGGGTATGGGGTCCAGTGTGTCTTGCATATGGTTTGTGTCTGTGTTGAGTATGCTAGGAGAAGGGAGTTGAGTAATGCTGCCGGGGGAGGTGTTAGGAATGGTGGATGGAGTGTTATCGGGAATGGGAATTCGGCTCCTGGTTTGGGTTTGAATTCGGGGTCGAATCGGTCTAATTACTCCAATTCGAGCTCCAATTCTAGCTCTTCGGCTAGTATGGATGGGGATTATGTGGAGTTTGCATCAGAGCGCCGTGTCGATGAGGATAACACTAGTGTTGCAAAGCATCTGGAGTCGGCAAACACAATGTTTTCCTTTATATGGTGGATCATTGGATTCTATTGGGTATCCTCTGGTGGGCAAAATCTAGCAGATGATGCACCAAAGCTGTACTGGCTCACAATTACATTTCTGGCGTTTGATGTGTTCTTTGTTGTAATTTGTGTTGCCGTGGCTTGCATCATTGGCATTGCTGTCTGCTGTTGTCTTCCATGTATCATTGCAATCCTCTATGCTGTGGCAGATCAGGAAGGAGCTACTAGAGAGGATATTGAGCGGCTGCCGAGATACAAGTTCAGGAGATTAGGCGGTGGTGAAAAAGAAAGTGGTGAAATACAGGAATCATTTACTGCAGTTATGACTGAATGCGACACTGACACCCCCATTGAACATGTTCTTTCCTTAGAGGATGCTGAGTGCTGCATATGCCTTTCTGCATATGATGATGGGAATGAACTTCGTGAACTTCCCTGCCGGCACCATTTCCACTCACCTTGTATAGACAAATGGCTACACATCAATGCAACCTGTCCCCTCTGCAAATACAACATATTGAAGAATGGTAACCAGAGCAGTGACGAAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_168379.p1 GENE.S_Transcript_168379~~S_Transcript_168379.p1 ORF type:complete len:412 (+),score=50.62,zf-RING_2|PF13639.2|9.4e+03,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|2.1e-13,zf-RING_11|PF17123.1|2.7e-09,zf-C3HC4|PF00097.21|1.4e+04,zf-C3HC4|PF00097.21|4.3e-07,zf-rbx1|PF12678.3|2.1e-05 S_Transcript_168379:180-1415(+)
MSTTPQYVETNSTTPLLSPTESSTGDRSFRSRSRRFSRRAGLMGAARFLRRANSRGGGMMTEQSVRVREVAAQQIEERQSDWAYSTPIVVLDLLWNTIFVLVAIVMLILSRDETTSVPLRLWLVGYGVQCVLHMVCVCVEYARRRELSNAAGGGVRNGGWSVIGNGNSAPGLGLNSGSNRSNYSNSSSNSSSSASMDGDYVEFASERRVDEDNTSVAKHLESANTMFSFIWWIIGFYWVSSGGQNLADDAPKLYWLTITFLAFDVFFVVICVAVACIIGIAVCCCLPCIIAILYAVADQEGATREDIERLPRYKFRRLGGGEKESGEIQESFTAVMTECDTDTPIEHVLSLEDAECCICLSAYDDGNELRELPCRHHFHSPCIDKWLHINATCPLCKYNILKNGNQSSDEV*

Click here to download the sequence:
Link to NCBI Protein BLAST