Transcript Information: S_Transcript_16840.p1


Annotated TAIR IDAT1G17760.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)CSTF77, ATCSTF77
Annotation TypeOrtholog
Chromosome Positionchr1:6110208-6116271 | Reverse length=734
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.309862408803
Replicate 212.184811391014
Replicate 311.124974849357
Condition 2: 8 Hour
Replicate 112.749496087723
Replicate 213.884940911787
Replicate 312.115173437684
Condition 3: 24 Hour
Replicate 113.909275681008
Replicate 211.483808010535
Replicate 312.002447404579


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16840.p1 GENE.S_Transcript_16840~~S_Transcript_16840.p1 ORF type:complete len:746 (+),score=148.39,Suf|PF05843.10|1.3,Suf|PF05843.10|1.3e+02,Suf|PF05843.10|21,Suf|PF05843.10|2.5e-71,Suf|PF05843.10|1.9e+03,TPR_14|PF13428.2|80,TPR_14|PF13428.2|2.1e-06,TPR_14|PF13428.2|7.9,TPR_14|PF13428.2|4.8e+03,TPR_14|PF13428.2|3.7e+02,TPR_14|PF13428.2|8.7,TPR_14|PF13428.2|1.6e+04,TPR_16|PF13432.2|8,TPR_16|PF13432.2|0.0034,TPR_16|PF13432.2|0.0049,TPR_16|PF13432.2|5.9e+02,TPR_16|PF13432.2|9.2e+02,TPR_16|PF13432.2|8.1,TPR_15|PF13429.2|8.7e+02,TPR_15|PF13429.2|0.033,TPR_15|PF13429.2|0.0018,TPR_19|PF14559.2|0.023,TPR_19|PF14559.2|0.067,TPR_19|PF14559.2|0.0047,TPR_19|PF14559.2|2.6e+03 S_Transcript_16840:211-2448(+)
ATGGTTGATAATAGCAATAATAATAACAATAAATACAATGTTGAGGCCGCTGAGATTTTGGCTAATGAGGCACTGCATTTGCCAATAAACGAGGCGGCCCCTATATACGAGCAACTTCTAGGCATATACCCTACTGCTGCAAAATTTTGGAAGCAGTATGCGGATGCTCAAATGGCTATTAATAATGATGATGCAACAAAACAGATCTTTAGCCGTTGCCTATTAAACTGTCTCAATGTTCCTCTTTGGAGATGTTACATTCGTTTTATAAAGAAGGCCAATGAGAAGAAGGGTTTTGAGGGTCAAGAAGAGACAAGGAAAGCCTTTGATTTTATGCTGAACTTTGTTGGTGTGGATATTGGTTCTGGCCCCGTATGGATGGAGTACATCAGTTTTTTAAAGTCCTTACCGGCCCATACAGCACAGGAAGAGACTCAACGAATGATTTCTGTACGGAAAGCTTATCAAAAAGCTATTGTCACTCCGACTCACCATGTTGAACAACTATGGAAGGAATATGAGAATTTTGAAAATTCTGTTAGCCGTGCATTGGCTAAAGGGCTTATTTCTGATTACCAGCCAAAATACAACAGTGCAAGAGCTGTATACAGAGAGCGGAAGAAATACATTGATGAAATTGATTGGAATATGCTAGCAGTTCCGCCTGCTGGGTCTTGCAAGGAGGAGCAACAATGGGTGGCATGGAAAAGGCTTTTAGCATTTGAAAAAGGGAACCCACAGAGGATTGACAGTGCATCTTCGAACAAGAGAATTGTCTTCACCTATGAGCAGTGTCTGATGTACTTATACCATTATCCTGATATATGGTATGACTATGCTACATGGCATGCAAAAAGTGGTTCCATAGATGCGGCTATCAAAGTTTATCAGAGAGCTATTAAGGCCCTTCCAGATTCTGATATGTTAAAATATGCTTATGCTGAACTGGAGGAATCGCGTGGAGCAATCCAGCCTGCAAAGAAAATTTATGAGAACTTGTTGGAGGACTGTGTGAATGCAACAGCCCTTGCCCATATTCAGTTTATGAGGTTTCTTAGACGAACAGAAGGAGTTGAAGCAGCCCGCAAATACTTTCTGGATGTCAGAAAGTCACCAAATTGCACATATCATGTATATGTTGCATATGCTATGATGGCCTTTTGTCTTGACAAAGATCCTAAGATTGCGCATAATATATTCGAAGCAGGACTGAAACGATTTATGCATGAACCAGGATACATTCTTGAATATGCAGATTTTCTATCACGTCTCAATGATGATAGAAATATCAGAGCCTTGTTTGAGCGTGCTCTCAACTCCCTTCCTCCCGAGGAATCTGTAGAGGTTTGGAAGCGATTTGCGGAATTTGAGCAAACATACGGAGATCTTGCTAGCATGCTTAAGGTCGAGCAAAGAAGGAAAGAGGCTCTTTCTAGGACCAGTGATGATGGAGCCGCCGCGCTGGAGGATTCACTTCAGGATGTCATTTCACGATACAGTTTTATGGATCTTTGGCCATGTTCTGCCAAGGATTTGGATCATTTAGCACGGCAGACGTGGCTAGCTAAGAACATGAACAAGAAAGCAGAGAAGCCTGGTTTACCAAATGGAGTTGGCGCTGCAGGTGAAGAAAAAGGTGCCTCGGGATTGACTAATTTGTCGGATCAATCTTCAAAAGTTGTTTATCCAGATATTACCCAGATGGTGATTTATGAGCCAGGGCAAAAATCTGGGACTGGAGTTCTTCCCAGTGGAGCAGCAGTTGTCCCCAGTACCTTGTCAACATATGATGGGATTCTTAAGGCTGCTCCCCCTGCGCTTGTAGCATTTATAGCCAACCTTCCTGCTGTTGAAGGTCCAGCTCCAGATGTAGATTTTGTTCTTTCAATTTGTTTACAAAGCAGCACTGCAGCACCCCAACCTATAAAACATGCAGCCTCAGCAACACAAATACCTACTGGTGCTGCTCCTAGTTTAAGTGAGCCTTCTGGTTCATACAAATCCCGCCCTGTTCAAAGCAGCGTGTCTGCGAGAATGACAAGAGATAGATCATCTGGGAAGAGGAAAGACGCAGGGAGGCAAGATGATGATGAAACTACGAGTGTTCAGAGCGTGCCACTTCCTAAAGATGTCTTCCGGATACGCCAAATGCAGAAAGCTCGCGGAGGAACCACTTCACAGACGGGATCAACGTCATATGGAAGTGCTTTTTCTGAACATTCTGGGAGCACTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16840.p1 GENE.S_Transcript_16840~~S_Transcript_16840.p1 ORF type:complete len:746 (+),score=148.39,Suf|PF05843.10|1.3,Suf|PF05843.10|1.3e+02,Suf|PF05843.10|21,Suf|PF05843.10|2.5e-71,Suf|PF05843.10|1.9e+03,TPR_14|PF13428.2|80,TPR_14|PF13428.2|2.1e-06,TPR_14|PF13428.2|7.9,TPR_14|PF13428.2|4.8e+03,TPR_14|PF13428.2|3.7e+02,TPR_14|PF13428.2|8.7,TPR_14|PF13428.2|1.6e+04,TPR_16|PF13432.2|8,TPR_16|PF13432.2|0.0034,TPR_16|PF13432.2|0.0049,TPR_16|PF13432.2|5.9e+02,TPR_16|PF13432.2|9.2e+02,TPR_16|PF13432.2|8.1,TPR_15|PF13429.2|8.7e+02,TPR_15|PF13429.2|0.033,TPR_15|PF13429.2|0.0018,TPR_19|PF14559.2|0.023,TPR_19|PF14559.2|0.067,TPR_19|PF14559.2|0.0047,TPR_19|PF14559.2|2.6e+03 S_Transcript_16840:211-2448(+)
MVDNSNNNNNKYNVEAAEILANEALHLPINEAAPIYEQLLGIYPTAAKFWKQYADAQMAINNDDATKQIFSRCLLNCLNVPLWRCYIRFIKKANEKKGFEGQEETRKAFDFMLNFVGVDIGSGPVWMEYISFLKSLPAHTAQEETQRMISVRKAYQKAIVTPTHHVEQLWKEYENFENSVSRALAKGLISDYQPKYNSARAVYRERKKYIDEIDWNMLAVPPAGSCKEEQQWVAWKRLLAFEKGNPQRIDSASSNKRIVFTYEQCLMYLYHYPDIWYDYATWHAKSGSIDAAIKVYQRAIKALPDSDMLKYAYAELEESRGAIQPAKKIYENLLEDCVNATALAHIQFMRFLRRTEGVEAARKYFLDVRKSPNCTYHVYVAYAMMAFCLDKDPKIAHNIFEAGLKRFMHEPGYILEYADFLSRLNDDRNIRALFERALNSLPPEESVEVWKRFAEFEQTYGDLASMLKVEQRRKEALSRTSDDGAAALEDSLQDVISRYSFMDLWPCSAKDLDHLARQTWLAKNMNKKAEKPGLPNGVGAAGEEKGASGLTNLSDQSSKVVYPDITQMVIYEPGQKSGTGVLPSGAAVVPSTLSTYDGILKAAPPALVAFIANLPAVEGPAPDVDFVLSICLQSSTAAPQPIKHAASATQIPTGAAPSLSEPSGSYKSRPVQSSVSARMTRDRSSGKRKDAGRQDDDETTSVQSVPLPKDVFRIRQMQKARGGTTSQTGSTSYGSAFSEHSGSTS*

Click here to download the sequence:
Link to NCBI Protein BLAST