Transcript Information: S_Transcript_168475.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value8E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1613093304592
Replicate 23.0754191504415
Replicate 32.9061281101431
Condition 2: 8 Hour
Replicate 12.1971614266137
Replicate 23.5252609977751
Replicate 32.9712999691792
Condition 3: 24 Hour
Replicate 13.0450443653556
Replicate 23.159197977309
Replicate 33.9743827547456


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_168475.p1 GENE.S_Transcript_168475~~S_Transcript_168475.p1 ORF type:5prime_partial len:165 (+),score=14.29,RVT_1|PF00078.23|1.9e-08 S_Transcript_168475:2-496(+)
CAAGAAAAAAAAAAAAAAAAAATTAAAAGAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAGATTTTAACTTCCACCCTAAATGTGCTAGACAAGGGATCACCCATTTAGTTTTTGCTGATGACTTAATGTTGTATGCAAGAGGAGATTTGGGGTTAGTGCAGCTGATTCAGGCAGCATTGGATAAATTTTCTCAAGCATCAGGCTTAAAGGCAAACTTGGACAAAAGCTCTTTTTACCGCAGTGGAATCTCTGAAGATGAAAAGTTTATTCTCCTGGCTAATTTCAATATGCAGGAGAAGCTCCCTGTATGTTATCTGGGAGTTCCTCTCTCACACAAGAAATTGACCATTGAGCAATGTCTACCCTGGGTTTATAAAATTACAGCTAGAATCTCAAGTTGGACATCAAGGTTCCTCTCATATGCTGCTAGAATTCAGCTGGTTCAAGTAGTTATCTTTGGGATTCACGCATTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_168475.p1 GENE.S_Transcript_168475~~S_Transcript_168475.p1 ORF type:5prime_partial len:165 (+),score=14.29,RVT_1|PF00078.23|1.9e-08 S_Transcript_168475:2-496(+)
QEKKKKKIKRKKKKKKKKKKKKKKKPDFNFHPKCARQGITHLVFADDLMLYARGDLGLVQLIQAALDKFSQASGLKANLDKSSFYRSGISEDEKFILLANFNMQEKLPVCYLGVPLSHKKLTIEQCLPWVYKITARISSWTSRFLSYAARIQLVQVVIFGIHAL*

Click here to download the sequence:
Link to NCBI Protein BLAST