Transcript Information: S_Transcript_168571.p1


Annotated TAIR IDAT3G25970.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:9500116-9502221 | Reverse length=701
E-Value2E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.6291489653707
Replicate 21.5125789531157
Replicate 30.74119743125582
Condition 2: 8 Hour
Replicate 12.2182439100564
Replicate 23.173311863791
Replicate 33.0235244829761
Condition 3: 24 Hour
Replicate 10.61971300682537
Replicate 20.85726001234411
Replicate 31.5502911454681


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_168571.p1 GENE.S_Transcript_168571~~S_Transcript_168571.p1 ORF type:complete len:423 (+),score=80.05,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|7.6e-10,PPR_2|PF13041.2|0.49,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|0.61,PPR_2|PF13041.2|1.9e-07,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|1.1e-09,PPR|PF01535.16|7.7e-05,PPR|PF01535.16|0.00012,PPR|PF01535.16|5.1,PPR|PF01535.16|0.21,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|0.015,PPR|PF01535.16|0.19,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|6.9e+03,PPR|PF01535.16|4.5e-06,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.77,PPR_1|PF12854.3|6.7,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|5.8,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|10,PPR_1|PF12854.3|5.3e+03,PPR_1|PF12854.3|0.0079,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|33,PPR_3|PF13812.2|4.7e-05,PPR_3|PF13812.2|0.36,PPR_3|PF13812.2|64,PPR_3|PF13812.2|8.8e+02,PPR_3|PF13812.2|0.067,PPR_3|PF13812.2|1.1e+04 S_Transcript_168571:248-1516(+)
ATGAGGTCATTGAAATCAGCCCTCAGAAGCTCTATCTACGAGGTTTCAATAACCCATAGTCGGGCTTTGAAGTTGGGCATCATCCGAGACATATACACTGCCAACAACATCATTACGGGTTATGCAAGATGTGGTCAGTTGGGTATTGCACACCAACTGTTCGACGAAATGCGTCAAAGAGATACTGTGTCTTGGAACGCTGTGATTTCTGGCTATGTAAATTCTGGGAATTTTGGCCCTTCTTGGGGTCTTTTGAATGATATGAGAAAAGCTGGGTTCTTGGTTGATGGGTACACTTTTGGTAGCCTTTTGAAGGGCATTGCTTTGAATGGTGAGATTGACTGTGGGGAGCAATTGCATTCTATGATCATTAAGTTGGGATGTCAATCTAATGTGTATACTGGGAGTGCCCTTTTGGATATGTATCACAAGTGTGGTAGGATTGATGATGCATTGATGGCTTTCAAGACTATGCCAGTGAGCAATTCTGTTTGTTGGAACGCTATGATTGCTGGTTTCGTTGAGCAGGGCGAGTTTGATACTGCATTTGAGCTTTTGGGGTCTATGGAAAGAGAGGGTGTGATGATTGAAGACGGGACACTTGCTCCGTTCTTAACTTTGCTTAATGGTGCTGAATATTTCAAGTTAACTATGCAGCTTCATGGGAAGATCATCAAGAATGGGTTGGTTTGTTGTAATAATGTGTGCAATGCTTTGATCACATCATATTCTGAGTGTGGGTCATTGGAAAATGCTGAGAAGGTGTTTTATGAGGCTGTTGATGTCCATGATTCGGTAACCTGGAATTCCATGTTAGGTTCTTACCTTCTACATCATGAGGAAGGACTTGCACTTCAACTCTTTGTTAATATGCAACTTATTGGTTATGAACCTGATATTTATACATATACTAGTGCTGTGAGTGCTTGTTTCGAAGAGTCATATCAACTCCATGGAAAATGTTTCCACTCCTTAATAATAAAGAGGGGGCTAGAGAGATCCACGCCGATATCTAATGCACTAGTAGCTATGTATCTAAAGTCGAGTGGAAAATCGATGGTGGATGCACTGAGGTTGTTTGAATCAATAGATCCTAAAGATTCTGTCTCTTGGAATTCTGTTTTGAAAGGGTTCTCACAGTTTGGCTTGAGCGAAGATGCTGTGAAATTCTTTGGGGATATGCGATCACATGATGTTGGGATTGATCACTATTCTTTTTCTGCTGTCCTAAGATCTTGTGCAGACTTAGCAGCCTTGCAGTTGGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_168571.p1 GENE.S_Transcript_168571~~S_Transcript_168571.p1 ORF type:complete len:423 (+),score=80.05,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|7.6e-10,PPR_2|PF13041.2|0.49,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|0.61,PPR_2|PF13041.2|1.9e-07,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|1.1e-09,PPR|PF01535.16|7.7e-05,PPR|PF01535.16|0.00012,PPR|PF01535.16|5.1,PPR|PF01535.16|0.21,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|0.015,PPR|PF01535.16|0.19,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|6.9e+03,PPR|PF01535.16|4.5e-06,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.77,PPR_1|PF12854.3|6.7,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|5.8,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|10,PPR_1|PF12854.3|5.3e+03,PPR_1|PF12854.3|0.0079,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|33,PPR_3|PF13812.2|4.7e-05,PPR_3|PF13812.2|0.36,PPR_3|PF13812.2|64,PPR_3|PF13812.2|8.8e+02,PPR_3|PF13812.2|0.067,PPR_3|PF13812.2|1.1e+04 S_Transcript_168571:248-1516(+)
MRSLKSALRSSIYEVSITHSRALKLGIIRDIYTANNIITGYARCGQLGIAHQLFDEMRQRDTVSWNAVISGYVNSGNFGPSWGLLNDMRKAGFLVDGYTFGSLLKGIALNGEIDCGEQLHSMIIKLGCQSNVYTGSALLDMYHKCGRIDDALMAFKTMPVSNSVCWNAMIAGFVEQGEFDTAFELLGSMEREGVMIEDGTLAPFLTLLNGAEYFKLTMQLHGKIIKNGLVCCNNVCNALITSYSECGSLENAEKVFYEAVDVHDSVTWNSMLGSYLLHHEEGLALQLFVNMQLIGYEPDIYTYTSAVSACFEESYQLHGKCFHSLIIKRGLERSTPISNALVAMYLKSSGKSMVDALRLFESIDPKDSVSWNSVLKGFSQFGLSEDAVKFFGDMRSHDVGIDHYSFSAVLRSCADLAALQLG*

Click here to download the sequence:
Link to NCBI Protein BLAST