Transcript Information: S_Transcript_16878.p1


Annotated TAIR IDAT4G38495.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: YL1 nuclear, C-terminal (InterPro:IPR013272); Has 279 Blast hits to 279 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 94; Fungi - 133; Plants - 35; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:18007466-18008025 | Reverse length=124
E-Value6E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9716595714073
Replicate 22.4244823689577
Replicate 32.4320091538814
Condition 2: 8 Hour
Replicate 11.4060696912395
Replicate 22.7042893960109
Replicate 33.7478413371396
Condition 3: 24 Hour
Replicate 14.8010732946361
Replicate 24.2338988659111
Replicate 35.5433064626629


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16878.p1 GENE.S_Transcript_16878~~S_Transcript_16878.p1 ORF type:5prime_partial len:91 (+),score=13.19 S_Transcript_16878:3-275(+)
TTTCCCTTAAATTTATCAGAATTTATTTCTGCGGCTCCAAAGAATAACATGGAGTCAGCACCAAAAAAAAAAAAAAAGAATAACATGGAGAGAGAGGTGATAGAGGCAGAGCTGGTCTTGCCCACCCACATGAAGTTCAAGAAGATTCAAATGTATGAGAAATACCCTAAAGGTCAATCTAGGTCTCGCCATTGGAAACATCTTAAACAAATTCTCCAGGCTGAGATTTCTCAGAACTTCCCTCCTCATGAACCCAATTGCACCTTATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16878.p1 GENE.S_Transcript_16878~~S_Transcript_16878.p1 ORF type:5prime_partial len:91 (+),score=13.19 S_Transcript_16878:3-275(+)
FPLNLSEFISAAPKNNMESAPKKKKKNNMEREVIEAELVLPTHMKFKKIQMYEKYPKGQSRSRHWKHLKQILQAEISQNFPPHEPNCTLS*

Click here to download the sequence:
Link to NCBI Protein BLAST