Transcript Information: S_Transcript_168893.p1


Annotated TAIR IDAT5G14460.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4660239-4662543 | Reverse length=540
E-Value1.3E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.813667261383
Replicate 212.393295368728
Replicate 313.319753838156
Condition 2: 8 Hour
Replicate 113.95365045442
Replicate 219.886087679757
Replicate 320.131633849149
Condition 3: 24 Hour
Replicate 19.9785270265677
Replicate 29.2334047162897
Replicate 311.365489145515


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_168893.p1 GENE.S_Transcript_168893~~S_Transcript_168893.p1 ORF type:5prime_partial len:162 (-),score=25.19,TruB_N|PF01509.14|3.4e-32,TruB_C_2|PF16198.1|2.2e-09 S_Transcript_168893:1-486(-)
GGTATGATTAAGGGTTACAGTGGAGTCTTCCGTTTGGGGGAGGCTACTTCAACGTGGGATGCAGATTCACTGGTAATTCAACGTGAACCATGGGAACACATTAAGGATGAGGACATAAAGAAGACTGCTGCATCGTTTACTGGAGAAATATGGCAAGTTCCTCCAATGTTTTCTGCAATCAAAATTGGTGGTGAAAGAATGTATGAGAAAGCAAGGAGAGGAGAAAGCATTGAACTTTCACCCAGACGTATATCAATATTTCAGTTCGATATAGAGCGCAGTTTAGAAGACAGGCAAAACTTAATTTTCCGGGTTACCTGTTCCAAAGGTACATACATTCGGTCCCTCTGTGCCGACTTTGGGAGAGCACTTGAAAGTTGTGCGCATTTAACTGCGTTGCGGAGAGATTCAATTGGGGAATATACTGCTGAAGATGCATATGATTTTCAAGAATTAGAGGAGCAAATCACAAAAAGCTATTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_168893.p1 GENE.S_Transcript_168893~~S_Transcript_168893.p1 ORF type:5prime_partial len:162 (-),score=25.19,TruB_N|PF01509.14|3.4e-32,TruB_C_2|PF16198.1|2.2e-09 S_Transcript_168893:1-486(-)
GMIKGYSGVFRLGEATSTWDADSLVIQREPWEHIKDEDIKKTAASFTGEIWQVPPMFSAIKIGGERMYEKARRGESIELSPRRISIFQFDIERSLEDRQNLIFRVTCSKGTYIRSLCADFGRALESCAHLTALRRDSIGEYTAEDAYDFQELEEQITKSYF*

Click here to download the sequence:
Link to NCBI Protein BLAST