Transcript Information: S_Transcript_16906.p1


Annotated TAIR IDAT1G21065.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7374210-7375644 | Forward length=217
E-Value6.5E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 157.775233450734
Replicate 255.251259319247
Replicate 360.687635830651
Condition 2: 8 Hour
Replicate 153.040073352869
Replicate 248.185520147104
Replicate 344.271375794961
Condition 3: 24 Hour
Replicate 152.838478870411
Replicate 260.63053866151
Replicate 358.20471785796


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16906.p1 GENE.S_Transcript_16906~~S_Transcript_16906.p1 ORF type:5prime_partial len:117 (+),score=17.90,UPF0047|PF01894.13|3.5e-38 S_Transcript_16906:3-353(+)
GAGATTGGAGACGAGTTATCTGAATTGAAATGTGGGCTTGCTCATCTTTTCTTACAACATACCAGTGCTTCTCTGACAATAAATGAGAATTATGATGCTGATGTTCGAGAGGACACTGAGACATTCCTCAACAGGGTAGTGCCAGAGGGAAGTTCTGCACCTTGGAAGCATACTCTAGAAGGACCGGATGACATGCCAGCTCATATTAAGTCATCAATGTTCGGCTGCACATTAACGATTCCAATCACTGATGGAAAGCTTAACATGGGAACTTGGCAGGGAATATGGCTATGTGAGCACCGTGATTACCCAACCCCGCGCAAAGTTGTTGTGACACTTAATGGAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16906.p1 GENE.S_Transcript_16906~~S_Transcript_16906.p1 ORF type:5prime_partial len:117 (+),score=17.90,UPF0047|PF01894.13|3.5e-38 S_Transcript_16906:3-353(+)
EIGDELSELKCGLAHLFLQHTSASLTINENYDADVREDTETFLNRVVPEGSSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGKLNMGTWQGIWLCEHRDYPTPRKVVVTLNGI*

Click here to download the sequence:
Link to NCBI Protein BLAST