Transcript Information: S_Transcript_16908.p1


Annotated TAIR IDAT1G21065.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7374210-7375644 | Forward length=217
E-Value5.7E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.644862135391
Replicate 230.580701981619
Replicate 328.948092080588
Condition 2: 8 Hour
Replicate 130.233464753404
Replicate 226.478074022968
Replicate 323.339504023176
Condition 3: 24 Hour
Replicate 132.214290210813
Replicate 229.835903847343
Replicate 335.917468298425


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16908.p1 GENE.S_Transcript_16908~~S_Transcript_16908.p1 ORF type:3prime_partial len:158 (+),score=30.23,UPF0047|PF01894.13|8.8e-21 S_Transcript_16908:46-471(+)
ATGGAGGCCTCAGCTATTTTGGGGGCAAAGCCATTTGCACCGTTTTCTTCCATTCGAATAAGATCAGTTCATAGCAGCCCAGCAATCGGCACCTCTTCTTCAAATTCAATGGCAGCGACTCCTTCTGCTCCCAAGTGGGCTCAGAAGACCATCACTCTCTCTCCTCATCGCCGTGGCTGCCACCTCATCACCTCTAAGGTACTGAAGGAGATCGGAGACGATTTATCTGAATTCAAATGTGGGCTTGCTCATCTTTTGTTACAACATACAAGTGCTTCTCTGACAATAAATGAGAATTATGATGCTGATGTTCGAGAGGACACTGAGACATTCCTCAACAGGGTAGTGCCAGAGGGAAGTTCTGCACCTTGGAAGCATACTCTAGAAGGACCGGATGACATGCCAGCTCATATTAAGTCATCAATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16908.p1 GENE.S_Transcript_16908~~S_Transcript_16908.p1 ORF type:3prime_partial len:158 (+),score=30.23,UPF0047|PF01894.13|8.8e-21 S_Transcript_16908:46-471(+)
MEASAILGAKPFAPFSSIRIRSVHSSPAIGTSSSNSMAATPSAPKWAQKTITLSPHRRGCHLITSKVLKEIGDDLSEFKCGLAHLLLQHTSASLTINENYDADVREDTETFLNRVVPEGSSAPWKHTLEGPDDMPAHIKSSM

Click here to download the sequence:
Link to NCBI Protein BLAST