Transcript Information: S_Transcript_16911.p1


Annotated TAIR IDAT1G21065.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7374210-7375644 | Forward length=217
E-Value3.5E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0276572369661
Replicate 22.1012180530966
Replicate 31.5808059500229
Condition 2: 8 Hour
Replicate 11.4216926878089
Replicate 22.3437174765428
Replicate 31.015040362142
Condition 3: 24 Hour
Replicate 13.9528836792504
Replicate 22.5901498944397
Replicate 35.0444088810232


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16911.p1 GENE.S_Transcript_16911~~S_Transcript_16911.p1 ORF type:5prime_partial len:105 (+),score=20.40,UPF0047|PF01894.13|8e-27 S_Transcript_16911:3-317(+)
GAGATTGGAGACGAGTTATCTGAATTGAAATGTGGGCTTGCTCATCTTTTCTTACAACATACCAGTGCTTCTCTGACAATAAATGAGAATTATGATGCTGATGTTCGAGAGGACACTGAGACATTCCTCAACAGGGTAGTGCCAGAGGGAAGTTCTGCACCTTGGAAGCATACTCTAGAAGGACCGGATGACATGCCAGCTCATATTAAGTCATCAATGATTCCAATCACTGATGGAAAGCTTAACATGGGAACTTGGCAGGTAATTGTAATTTCATCATGTCATTTCATGATTATTATGCTCTTGATGCCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16911.p1 GENE.S_Transcript_16911~~S_Transcript_16911.p1 ORF type:5prime_partial len:105 (+),score=20.40,UPF0047|PF01894.13|8e-27 S_Transcript_16911:3-317(+)
EIGDELSELKCGLAHLFLQHTSASLTINENYDADVREDTETFLNRVVPEGSSAPWKHTLEGPDDMPAHIKSSMIPITDGKLNMGTWQVIVISSCHFMIIMLLMP*

Click here to download the sequence:
Link to NCBI Protein BLAST