Transcript Information: S_Transcript_16917.p1


Annotated TAIR IDAT1G30700.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:10892623-10894437 | Forward length=527
E-Value3E-122
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39219159715003
Replicate 20.97540753833223
Replicate 30.11648043842274
Condition 2: 8 Hour
Replicate 12.1998823695569
Replicate 22.3078328070455
Replicate 32.9169054617343
Condition 3: 24 Hour
Replicate 10.50588151241376
Replicate 21.1928321882288
Replicate 30.47789136767588


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16917.p1 GENE.S_Transcript_16917~~S_Transcript_16917.p1 ORF type:complete len:475 (+),score=75.83,FAD_binding_4|PF01565.19|1.1e-24 S_Transcript_16917:219-1643(+)
ATGAAGGCAATAGTATTTTTAACCATATTGTCTTCCCTCCTCTACCTTTGGAAAGCATCTTCACAAACAACCACCACTAATAATAACAACTTCCTCGAATGCCTCAAAAACCAAACTAACCCACCTGCTGATATTTCTCACATACTTTATACCCCTTCAAATCCAGCTTTTCCCTCAATCTTAAGAGCACGTATTCAAAATCTCAGGTTCACAACTCCAAAAACATCAAAACCCAAATATCTCAGGACTCCTACTAAGAAATCCCATATCTCAGCTGCTATCATTTGCACGAAAATCACAGAACTAAGGCTCATAGTTCGAAGTGGTGGGCATGATTTTGATGGATTATCTTACATTTCTGATGTCCCCTTTGTAACTTTAGATATGGTTAATTTCAGAACAATTCAAGTAGATGTTGCCACAAAAACTGCTTATGTTGAAGCAGGGGCAACACTTGGGGAGTTCTACTACAGAATTTGGGAGAAGAGCAAAGTTCTTGGTTTCCCAGCTGGGGTTTGTCCAACTGTTGGGATTGGTGGGCATTTAAGTGGGGGTGGTTATGGTAATATGATGAGAAAATATGGGTTATCTGTTGACCAAATTATAGATGCTGAATTAGTAGATGTTAATGGCAGAATTCTTGACAGAAAATCAATGGGGGAAGATCTTTTTTGGGCTATCAGAGGTGGGAGTGGTGCTAGTTTTGGTGTTATTTTATCTTATACAGTTAATTTAGTCCATGTACCAGAAACTGTTACTGTGTTTAATGTCATGAGGTTTGAGAAAGATAATGTGACTAACCTTGTTCATAAATGGCAGAATGTAATGCAAGATATTGATGATGATTTGTTCATTAGACTGCTATTGCAGCCTGTGACAATACCCAAGAGTGAAAGAAGAGGAGGAAATAAGAAGGCGATTCGGGTCACTTTTATTTCACTCTTCTTAGGAAGTGCTGATAAGTTGATTTCAGTGATGAATTCAGGACTTCCTGAATTGGGTTTGCAGAAAAGCGATTGTTTCGAAATGAGTTGGGCTGAATCTGTGTTGTTTTGGTCTAATTACAACATTGGAACACCAGTCAATGTGTTATTGAATCGAACATATGATGCAAATTATCTTAAGAGGAAATCAGACTATGTAACAGAACCAATATCCAAAGATGGGTTGGAGCTTCTATGGAAGAAGTTGGTTGAGCTTGGCAAACCTGGGTTAGTCTTCAATTCGTATGGTGGGAAGATGAAAGAAATTCAAACAACTGAAACCCCATTTCCTCATCGAAATGGGATCTTTTACAACATTCAGTATTCGATTGATTGGAACAAACCAGGGTATAAAGAAGACAGCACAAATCTCGCGTTGTTAAGACAGTTATACGATTTCAAGACTCCATGTGTCGAAATCCCCAAGACGGGCATACCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16917.p1 GENE.S_Transcript_16917~~S_Transcript_16917.p1 ORF type:complete len:475 (+),score=75.83,FAD_binding_4|PF01565.19|1.1e-24 S_Transcript_16917:219-1643(+)
MKAIVFLTILSSLLYLWKASSQTTTTNNNNFLECLKNQTNPPADISHILYTPSNPAFPSILRARIQNLRFTTPKTSKPKYLRTPTKKSHISAAIICTKITELRLIVRSGGHDFDGLSYISDVPFVTLDMVNFRTIQVDVATKTAYVEAGATLGEFYYRIWEKSKVLGFPAGVCPTVGIGGHLSGGGYGNMMRKYGLSVDQIIDAELVDVNGRILDRKSMGEDLFWAIRGGSGASFGVILSYTVNLVHVPETVTVFNVMRFEKDNVTNLVHKWQNVMQDIDDDLFIRLLLQPVTIPKSERRGGNKKAIRVTFISLFLGSADKLISVMNSGLPELGLQKSDCFEMSWAESVLFWSNYNIGTPVNVLLNRTYDANYLKRKSDYVTEPISKDGLELLWKKLVELGKPGLVFNSYGGKMKEIQTTETPFPHRNGIFYNIQYSIDWNKPGYKEDSTNLALLRQLYDFKTPCVEIPKTGIP*

Click here to download the sequence:
Link to NCBI Protein BLAST