Transcript Information: S_Transcript_16919.p1


Annotated TAIR IDAT1G30700.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:10892623-10894437 | Forward length=527
E-Value1E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.04727088194
Replicate 21.8896370685834
Replicate 32.9457147911307
Condition 2: 8 Hour
Replicate 12.1720304952636
Replicate 22.4857609599696
Replicate 32.0230318328802
Condition 3: 24 Hour
Replicate 11.466438938026
Replicate 22.5706638130579
Replicate 31.459609051222


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16919.p1 GENE.S_Transcript_16919~~S_Transcript_16919.p1 ORF type:3prime_partial len:432 (+),score=78.27,FAD_binding_4|PF01565.19|9.5e-25 S_Transcript_16919:219-1511(+)
ATGAAGGCAATAAAATTTTTAACCATTTTGTCTTCCCTCCTCTTCCTTTGGAAAGCATCTTCACAAACAACCACCACTAATAATAACAACTTCCTCGAATGCCTCAAAAACCAAACTAACCCACCTGCTGATATTTCTCACATACTTTATACCCCTTCAAATCCAGCTTTTCCCTCAATCTTAAGAGCACGTATTCAAAATCTCAGGTTCACAACTCCAAAAACATCAAAACCCAAATATCTCAGGACTCCTACTAAGAAATCCCATATCTCAGCTGCTATCATTTGCACGAAAATCACAGAACTAAGGCTCATAGTTCGAAGTGGTGGGCATGATTTTGATGGATTATCTTACATTTCTGATGTCCCCTTTGTAACTTTAGATATGGTTAATTTCAGAACAATTCAAGTAGATGTTGCCACAAAAACTGCTTATGTTGAAGCAGGGGCAACACTTGGGGAATTTTACTATAGAATTTGGGAAAAGAGCAAAGTTCTTGGTTTCCCTGCTGGGGTTTGTCCAACTGTTGGGATTGGTGGGCATTTAAGTGGGGGTGGTTATGGTAATATGATGAGAAAATATGGGTTATCTGTTGACCAAATTATAGATGCTGAATTAGTAGATGTTAATGGCAGAATTCTTGACAGAAAATCAATGGGGGAAGATCTTTTTTGGGCTATCAGAGGTGGGAGTGGTGCTAGTTTTGGTGTTATTTTATCTTATACAGTTAATTTAGTCCATGTACCAGAAACTGTTACTGTGTTTAATGTCATGAGGTTTGAGAAAGATAATGTGACTAACCTTGTTCATAAATGGCAGAATGTAATGCAAGATATTGATGATGATTTGTTCATTAGGCTTGATTTGCAGCCTATATATGTGCCTAAGAGTGAGGGAGGTAGTGGTAAGAGGGTGATTCGAGTCACTTTTATTTCACTCTTCTTAGGAAGTGCTGATAAGTTGATTTCAGTGATGAATTCAGGATTTCCTGAACTGGGTTTGCAGAAAAATGATTGTTTCGAAATGAGTTGGGCTGAATCTGTGTTGTTTTGGTATAATTATGACGTTGGAACACCAGTTGATGTATTATTGAATCGAACATACGATGCAAATTATCTCAAGAGGAAATCAGATTATGTAATGGAACCTATCTCCAAGGATCGGTTGGAGCTTCTATGGAAGAAGTTGGTTGAGCTTGGCAAACCTGGGTTAGTCTTCAATCCATATGGTGGGAAAATGAGAGAAATTTCAACGATCGAGACCCCATTTCCTCATCGAAATGGGATCTTTTAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16919.p1 GENE.S_Transcript_16919~~S_Transcript_16919.p1 ORF type:3prime_partial len:432 (+),score=78.27,FAD_binding_4|PF01565.19|9.5e-25 S_Transcript_16919:219-1511(+)
MKAIKFLTILSSLLFLWKASSQTTTTNNNNFLECLKNQTNPPADISHILYTPSNPAFPSILRARIQNLRFTTPKTSKPKYLRTPTKKSHISAAIICTKITELRLIVRSGGHDFDGLSYISDVPFVTLDMVNFRTIQVDVATKTAYVEAGATLGEFYYRIWEKSKVLGFPAGVCPTVGIGGHLSGGGYGNMMRKYGLSVDQIIDAELVDVNGRILDRKSMGEDLFWAIRGGSGASFGVILSYTVNLVHVPETVTVFNVMRFEKDNVTNLVHKWQNVMQDIDDDLFIRLDLQPIYVPKSEGGSGKRVIRVTFISLFLGSADKLISVMNSGFPELGLQKNDCFEMSWAESVLFWYNYDVGTPVDVLLNRTYDANYLKRKSDYVMEPISKDRLELLWKKLVELGKPGLVFNPYGGKMREISTIETPFPHRNGIFY

Click here to download the sequence:
Link to NCBI Protein BLAST