Transcript Information: S_Transcript_169311.p1


Annotated TAIR IDAT2G36980.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15531161-15533038 | Forward length=625
E-Value1.4E-235
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.670708162988
Replicate 28.9872385577736
Replicate 39.6043641585524
Condition 2: 8 Hour
Replicate 113.558315249551
Replicate 216.832493145865
Replicate 315.18669014668
Condition 3: 24 Hour
Replicate 18.9333708843324
Replicate 29.8475347424385
Replicate 39.7100841879121


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_169311.p1 GENE.S_Transcript_169311~~S_Transcript_169311.p1 ORF type:complete len:626 (+),score=84.73,PPR_2|PF13041.2|2.5,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|3.3e-09,PPR_2|PF13041.2|0.09,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|4.4e-08,PPR_2|PF13041.2|1.6e+02,PPR_2|PF13041.2|3.6e+03,PPR_2|PF13041.2|16,PPR|PF01535.16|0.62,PPR|PF01535.16|0.0054,PPR|PF01535.16|1.9e+03,PPR|PF01535.16|0.024,PPR|PF01535.16|0.036,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|0.0023,PPR|PF01535.16|0.14,PPR|PF01535.16|86,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|1.2,PPR|PF01535.16|2.9e+02,PPR|PF01535.16|0.27,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|29,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|4.1e+02,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|45,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|59,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|7.7,PPR_1|PF12854.3|0.065,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|2.8,PPR_1|PF12854.3|28,PPR_1|PF12854.3|79,PPR_1|PF12854.3|0.33,PPR_1|PF12854.3|0.49,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|0.06,PPR_1|PF12854.3|15,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|2.6e+02 S_Transcript_169311:229-2106(+)
ATGTGTTCAAGTTTGTTTAAGGCCACATCTCAAATTGTTGCGTCTGCAAGATCAGGTAGAATCACGGATGCCCGCAAGCTGTTCGACGAAATGACTACCAGAGACACAGTTGCTTGGAATGCCATTCTTTCTTCCTATTCTCATTTGGGTATTTACCAACAAGTCTTCTCTTTGTTCAAACAAATGAGAATCTCCAATACTAAGCCTGATCAGTTCACCTTTACGGCCACACTCAGTGCATGTGCTGGAGAAGGGGATGTGAGATATGGTTCAATAATTCATGCCTTAGTAGTGGGTTATGGGTGCCAGAATTCCGTGCCTGTGAGAAACTCTCTTATCGACATGTATGGAAAGTGTTTGAGTCCTTGTAGTGCCAGAAAAGTGTTCGAGGAGATGTGTTTAAGGAACGAAGTGTCGTGGTGTTCACTGTTGTTTTCCTATGTTAATGCTGGTCTATTTGATGCTGCTAATGATGTATTCTGGAGTATGCCGGAAAGGGTTGGAATTTCTTGGAACATAATGATTGCAGGTCATGCTCGATCAAGAGATTGTGAGTTGTGCTTGAGCTTATTTAGACAAATGAGAGAAAGTAATGGTTGTTACCCTGATCAATGGACTTTGAGTGCCCTCATGAACTCATGTACAGAAAGCAGCGAGTCTTTTTGTGGTCGTATGATCCATGCTTCTCTGGTTAAAAGTGGGTGGCATTCATCCATCGAAGTGAAAAACTCGATTTTAAGCTTCTATGCCCAACTGGGAAGTCGAGATGATATCCAGAAGACACTTGAGTCCATTGACTATTCATTAGATCAGATTTCCTTGAATGTTGTCATTGATGCTCATATGAAGATGGGAAATACCCATGAAGCCGAGCTTCTCTTTCAACGAATACCAGAGAAAAATATCATTTCTTGGACATCTATGATTGCTGGGTTCACAAGAAACGGGCAGCAAACACAAGCCATTAGCTTCTTTGTTGATTTGATGAGACATTCTGTTAGACCTGATGAGCTAGCCTTTGGTGCGGTCCTCCTTGCATGTTCTAGTTTAGCTGTAATTGGACATGGTATGGTGATCCATGGTTGCTTGATACGAAATGGTTTCGATGCCTGTGTTTATGTAGGCAACGGATTAGTCAACATGTATGCCAAGTGTGGTGACTTGGTTGCGTCAAGTAGAGCTTTTCGAAATATTATCAGCAAGGATTTGGTATCATGGAACACTATTTTGTTTGCATATGGATTGCATGGAAGGGCTAGGGAAGCATTACAACATTATGAAGAAATGTTAGCCTGTGGGATAAAACCTGATATTGTGACCTTTATTGGCTTGCTCATGACTTGCAGCCATTCTGGCCTTGTAGAGAATGTTCGATCCCTTTTTGAGTCTATGTTGTCAATTCATGGCTTATCCTACAACTTGCAGCATGTGACGTGTATTGTTGATATGCTTGGACGAGCTGGATATTTGACAGAAGCTAGATTGTTAGCAAGTGATTATCAGGGCATTAAAGCTGTAAAGACAAGGTCATCTGAAGCTATTCTAGGGGCATGTTCTGTAAACTTGGATATAGGAATGGCGACACAAATTGGGGAAGATTTGATGATTTCAGAACCTCAGAAAGATTTGAGCTATGTGTTATTGTCGAATTTGTATTGTGCGAGTGGGAAGTGGAAGGAAGCTGAGATTGTGAGGAAGGCTATGTCTGATCAAGGAGTGAAGAAAATACCTGGATGTAGTTGGATTGAAGTGAGAAATGACTTGACATGTTTTACTTCAGGGGACTACTCACACGCATGTATGGACAAGATATGTAAGACACTACTCATTCTCGAATTTGAAATGAAACAGCCTTGCTTTTACAGTTACAGCAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_169311.p1 GENE.S_Transcript_169311~~S_Transcript_169311.p1 ORF type:complete len:626 (+),score=84.73,PPR_2|PF13041.2|2.5,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|3.3e-09,PPR_2|PF13041.2|0.09,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|4.4e-08,PPR_2|PF13041.2|1.6e+02,PPR_2|PF13041.2|3.6e+03,PPR_2|PF13041.2|16,PPR|PF01535.16|0.62,PPR|PF01535.16|0.0054,PPR|PF01535.16|1.9e+03,PPR|PF01535.16|0.024,PPR|PF01535.16|0.036,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|0.0023,PPR|PF01535.16|0.14,PPR|PF01535.16|86,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|1.2,PPR|PF01535.16|2.9e+02,PPR|PF01535.16|0.27,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|29,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|4.1e+02,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|45,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|59,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|7.7,PPR_1|PF12854.3|0.065,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|2.8,PPR_1|PF12854.3|28,PPR_1|PF12854.3|79,PPR_1|PF12854.3|0.33,PPR_1|PF12854.3|0.49,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|0.06,PPR_1|PF12854.3|15,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|2.6e+02 S_Transcript_169311:229-2106(+)
MCSSLFKATSQIVASARSGRITDARKLFDEMTTRDTVAWNAILSSYSHLGIYQQVFSLFKQMRISNTKPDQFTFTATLSACAGEGDVRYGSIIHALVVGYGCQNSVPVRNSLIDMYGKCLSPCSARKVFEEMCLRNEVSWCSLLFSYVNAGLFDAANDVFWSMPERVGISWNIMIAGHARSRDCELCLSLFRQMRESNGCYPDQWTLSALMNSCTESSESFCGRMIHASLVKSGWHSSIEVKNSILSFYAQLGSRDDIQKTLESIDYSLDQISLNVVIDAHMKMGNTHEAELLFQRIPEKNIISWTSMIAGFTRNGQQTQAISFFVDLMRHSVRPDELAFGAVLLACSSLAVIGHGMVIHGCLIRNGFDACVYVGNGLVNMYAKCGDLVASSRAFRNIISKDLVSWNTILFAYGLHGRAREALQHYEEMLACGIKPDIVTFIGLLMTCSHSGLVENVRSLFESMLSIHGLSYNLQHVTCIVDMLGRAGYLTEARLLASDYQGIKAVKTRSSEAILGACSVNLDIGMATQIGEDLMISEPQKDLSYVLLSNLYCASGKWKEAEIVRKAMSDQGVKKIPGCSWIEVRNDLTCFTSGDYSHACMDKICKTLLILEFEMKQPCFYSYSN*

Click here to download the sequence:
Link to NCBI Protein BLAST