Transcript Information: S_Transcript_169365.p1


Annotated TAIR IDAT5G61140.2
Annotated Gene NameU5 small nuclear ribonucleoprotein helicase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24589999-24603311 | Forward length=2157
E-Value2.4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0560714775865
Replicate 21.4008120353978
Replicate 31.9028219768794
Condition 2: 8 Hour
Replicate 10.84624564750528
Replicate 20.53266306285063
Replicate 32.0300807242839
Condition 3: 24 Hour
Replicate 12.4272092767327
Replicate 20.71948608178881
Replicate 30.60052486678848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_169365.p1 GENE.S_Transcript_169365~~S_Transcript_169365.p1 ORF type:5prime_partial len:126 (-),score=13.06 S_Transcript_169365:314-691(-)
CTTCAGAGACATACAGCTTTAATTCTAAGGAAATATCCTGCTTTGAATACGATTGAGAGATTTGTAGCCATGAAAAGCAGCTTGCGCAAAGTCGTCCAGTTCTGTGATCGCTATTGCTTTTTTGTAGATCGGTTTAGTCATAATTATACACGCTTCTGGAATGCCTTAAACAGGGAAAAATTAGTCCATTTTGAAAATGTTATTCTCAACCTCTTCCCAGAAAGAAACCCATCTGCTTCAGAAGCAATTTTTGTTCACACTTCCTGTTCAGAGTACTACCTCCGTCCCAAAATTTTCTTCTTGCATGATTTCCGTGACTCACATTATTGTGAGTCACAAATGCCAAGGCAAAAGAAAATTTTGGGAAGGAGGGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_169365.p1 GENE.S_Transcript_169365~~S_Transcript_169365.p1 ORF type:5prime_partial len:126 (-),score=13.06 S_Transcript_169365:314-691(-)
LQRHTALILRKYPALNTIERFVAMKSSLRKVVQFCDRYCFFVDRFSHNYTRFWNALNREKLVHFENVILNLFPERNPSASEAIFVHTSCSEYYLRPKIFFLHDFRDSHYCESQMPRQKKILGRRE*

Click here to download the sequence:
Link to NCBI Protein BLAST