Transcript Information: S_Transcript_169542.p1


Annotated TAIR IDAT3G01610.1
Annotated Gene Namecell division cycle 48C
Annotated Gene Symbol(s)CDC48C, emb1354
Annotation TypeHomolog
Chromosome Positionchr3:231787-235057 | Forward length=820
E-Value2E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.94748176013867
Replicate 30.22629124028958
Condition 2: 8 Hour
Replicate 10.52332246177013
Replicate 20.54900242060679
Replicate 30
Condition 3: 24 Hour
Replicate 10.53607076050538
Replicate 20.69520894405974
Replicate 30.92841881245826


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_169542.p1 GENE.S_Transcript_169542~~S_Transcript_169542.p1 ORF type:complete len:163 (+),score=22.58 S_Transcript_169542:457-945(+)
ATGCATCTAATGTTGTTGACCTCTGATGTTGGTAGACCAGAGTCGATAGATCCTCCTCTCTTAAAGCCTGGAAGATTTGAGGAAAAATTATATGTTTCTCTTCCTAGTCCTGAGGAACGTGGATTAATATTAAAGGCCCTTGGTAGAAAAAGACCTATAGACGCCAGTGTCGATTTGCTTGCCTTAGGGAAAAACGAAGCTTGTGAACATTTTAGTGGTGCTGACCTTCATCGGCTGATGCGCAGAGCCAGCAACATTGCATGGGAGGAGATGCAATCATTGAAGCACACATGTTCTGATGTCGTTCCACAGTGGATTATCAGCATTAGTCATTTTGAAAAAGCGTTGGTGGAAGTGACCCCGTCTGTCAACAAAGAGGTAAAGTTTGTGTTCTATTGCATTATGTCATTGCGAAAGTGTGCCAGGCTAACGTATCTATCCTCGCTTTCTCTCTTCTCTGTGGTGGGAGCAGCAAAGAGAATACTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_169542.p1 GENE.S_Transcript_169542~~S_Transcript_169542.p1 ORF type:complete len:163 (+),score=22.58 S_Transcript_169542:457-945(+)
MHLMLLTSDVGRPESIDPPLLKPGRFEEKLYVSLPSPEERGLILKALGRKRPIDASVDLLALGKNEACEHFSGADLHRLMRRASNIAWEEMQSLKHTCSDVVPQWIISISHFEKALVEVTPSVNKEVKFVFYCIMSLRKCARLTYLSSLSLFSVVGAAKRIL*

Click here to download the sequence:
Link to NCBI Protein BLAST