Transcript Information: S_Transcript_169545.p2


Annotated TAIR IDAT3G01610.1
Annotated Gene Namecell division cycle 48C
Annotated Gene Symbol(s)CDC48C, emb1354
Annotation TypeHomolog
Chromosome Positionchr3:231787-235057 | Forward length=820
E-Value8E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4641667810352
Replicate 21.8385657964596
Replicate 31.5368946736334
Condition 2: 8 Hour
Replicate 11.1847439065074
Replicate 20.75953807110183
Replicate 31.1842137558323
Condition 3: 24 Hour
Replicate 11.2810271182756
Replicate 21.4689507503188
Replicate 31.4012246891731


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_169545.p2 GENE.S_Transcript_169545~~S_Transcript_169545.p2 ORF type:complete len:324 (+),score=69.83,AAA|PF00004.25|2.2e-39 S_Transcript_169545:1746-2717(+)
ATGCTCCATGCTGACAATTGGTGGAAGCAACTACAATTTAAACATGGACAATTGAAAACTCTTGCGCCAACAATGGCTGATTTTGAGGTGGCAGTTAAACATGTTCAACCCTCCTTGAAAAGAGAAGGTTTCTCTACAGTTCCAAGTGCAAAATGGGAGGATGTAGGAGGACTTGATAAAATAAGGAAGCTGTTCCAGAGTAGCATAATTCATCCAGTAAAATGCCCTGAAGATTATGAGGCGGTTCGAAAGGATTTACCAGCAGGATTTTTGCTTTATGGTCCCCCTGGTTGTGGTAAAACGTTGATTGCCAAGGCTGTTGCCAATGAGGCTGGGGCTAGTTTCATACATATCAAGGGCCCTGAAATTCTGGACAAATATGTTGGTGAAAGTGAATTGGCTGTTCGTCAAATATTCAGTCGCGCAAGGATGTGCTCTCCATGTATTATTTTCTTTGATGAGGTGGATGCTTTGACAGCAAAGCATGGAGGATATAGCGGTGTTACTGAAAGGGTTATGAAGCAGCTTCTGATTGAGCTAGATGGCGCAGAAGAAAGGCGCGGTGTATATGTCATTGGTGCAACAAAGTCGATAGATCCTCCTCTCTTAAAGCCTGGAAGATTTGAGGAAAAATTATATGTTTCTCTTCCTAGTCCTGAGGAACGTGGATTAATATTAAAGGCCCTTGGTAGAAAAAGACCTATAGACGCCAGTGTCGATTTGCTTGCCTTAGGGAAAAACGAAGCTTGTGAACATTTTAGTGGTGCTGACCTTCATCGGCTGATGCGCAGAGCCAGCAACATTGCATGGGAGGAGATGCAATCATTGAAGCACACATGTTCTGATGTCGTTCCACAGTGGATTATCAGCATTAGTCATTTTGAAAAAGCGTTGGTGGAAGTGACCCCGTCTGTCAACAAAGAGCAAAGAGAATACTATGATCGTTTGTCACGAAGATTCTCAGCAGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_169545.p2 GENE.S_Transcript_169545~~S_Transcript_169545.p2 ORF type:complete len:324 (+),score=69.83,AAA|PF00004.25|2.2e-39 S_Transcript_169545:1746-2717(+)
MLHADNWWKQLQFKHGQLKTLAPTMADFEVAVKHVQPSLKREGFSTVPSAKWEDVGGLDKIRKLFQSSIIHPVKCPEDYEAVRKDLPAGFLLYGPPGCGKTLIAKAVANEAGASFIHIKGPEILDKYVGESELAVRQIFSRARMCSPCIIFFDEVDALTAKHGGYSGVTERVMKQLLIELDGAEERRGVYVIGATKSIDPPLLKPGRFEEKLYVSLPSPEERGLILKALGRKRPIDASVDLLALGKNEACEHFSGADLHRLMRRASNIAWEEMQSLKHTCSDVVPQWIISISHFEKALVEVTPSVNKEQREYYDRLSRRFSAA*

Click here to download the sequence:
Link to NCBI Protein BLAST