Transcript Information: S_Transcript_169663.p1


Annotated TAIR IDAT3G02330.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:473881-476592 | Reverse length=903
E-Value2E-117
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46998677678023
Replicate 20.58444475649046
Replicate 30.8549612753987
Condition 2: 8 Hour
Replicate 11.2239738371864
Replicate 21.6297373181258
Replicate 32.1645231563557
Condition 3: 24 Hour
Replicate 10.33755890603567
Replicate 20.25015244565505
Replicate 30.72381142884439


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_169663.p1 GENE.S_Transcript_169663~~S_Transcript_169663.p1 ORF type:3prime_partial len:453 (+),score=51.61,PPR|PF01535.16|0.074,PPR|PF01535.16|0.0002,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|1.1,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|65,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|8.9e+03,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|0.0058,PPR_2|PF13041.2|2.7e-07,PPR_2|PF13041.2|51,PPR_2|PF13041.2|7e-06,PPR_2|PF13041.2|21,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|2.9e+03,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|5.3,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|25,PPR_3|PF13812.2|67,PPR_1|PF12854.3|3.5,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|0.059,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|9.8,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|28 S_Transcript_169663:82-1356(+)
ATGGCGGCAAACTTTTCCAATATTCCATTTAGGAAATCTTTTCCTAATTTCCGGTTATTCTCCTTCCAAATAGCATTTATCAGCACAGCTTATGCAACTGAATTAACGGGAATGCCACCCATCAAGAAGAAAACATTTTCCCACATTTTCCAAGAATGTACTCATCAAAGAGCTCTAAATCCAGGCAAACAAGCCCATGCCCAGATGATAATTTCTGGGTTCAAACCCACAATCTTTGTCACCAATTGTTTGATCCAAATGTATATAAAATGTTCCCATTTAGGATATGCCCACAAGGTGTTTGATAAAATGCCTGAACGAGATACAATCTCTTGGAACTCTCTGATTTTTGGTTATTCTGAACGAGGGAAGATGGAAACTGTGCAGCTTTTATTTGATATGATGCCTGTGAGAGATGTTGTATCTTGGAATACTTTAATTTCAAGCTACTTGCAAAATGGGTATCATCAGAAATGCATTGATATATTCCTGCATATTACTGAAATGGGTGTGTCCTTTGATCATACTACCTTAGCTATGGTGCTTAAATGTTGTTCCTTTTTGAATGACTATGTAATGGGTGTGCAAGTTCATGGGATTTTGGTGAAAATGGGTTTGGAGAGTGACATGGTATCAGGAAGTGCTGTAGTTGATATGTATGCGAAATGCAAGTGTTTGGATCATTCGTTGAGGTTCTTTAATGCAATGACCGACAAGAATTGGGTATGTTGGAGTGCTTTCATTGCAGGTTTCGTTCAGAATGGCCGGTTTTTTGATAGTTTAGAATGGTTTAAGGAGATGCAGAGACATAGAGTTGGAGTTTGTCAGTCTACTTATGCTAGTGTGTTTAGATCCTGTGCTGCTGTATTTGCACTTAATCTAGGCAGTCAGTTGCATGCTCATGCCTTGAAGACTGGCTTTGGTACTGACAAAGTTGTAGCTACCGCTACTCTGGATATGTACGCGAAGTGTCACAAATTTGCAGACTCTAGGAAAGTGTTCAACTCTATGCCTAGTCCTAGCTTGCAGTCCTTTAATGCCATGATAATTGGGTATGTACAGAGTGAACAAGGTTTTGAAGCATTGAAGCTTTTTCAACGCATGAAGATTACTGGCCTTTGTTTTGATGAAATAAGTTTATCCGGTGTCCTTATGGCATGTGCGGTGACCAAAGAACTCTCAGCCGGTTGTCAGCTGCACGGTTTAGCCATAAAGAGTAACTTTTGGTCCAATATTTGCGTTGCAAATGCAATTTTGGACATGTATGGAAAATGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_169663.p1 GENE.S_Transcript_169663~~S_Transcript_169663.p1 ORF type:3prime_partial len:453 (+),score=51.61,PPR|PF01535.16|0.074,PPR|PF01535.16|0.0002,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|1.1,PPR|PF01535.16|1.2e-05,PPR|PF01535.16|65,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|8.9e+03,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|0.0058,PPR_2|PF13041.2|2.7e-07,PPR_2|PF13041.2|51,PPR_2|PF13041.2|7e-06,PPR_2|PF13041.2|21,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|2.9e+03,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|5.3,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|25,PPR_3|PF13812.2|67,PPR_1|PF12854.3|3.5,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|0.059,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|9.8,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|28 S_Transcript_169663:82-1356(+)
MAANFSNIPFRKSFPNFRLFSFQIAFISTAYATELTGMPPIKKKTFSHIFQECTHQRALNPGKQAHAQMIISGFKPTIFVTNCLIQMYIKCSHLGYAHKVFDKMPERDTISWNSLIFGYSERGKMETVQLLFDMMPVRDVVSWNTLISSYLQNGYHQKCIDIFLHITEMGVSFDHTTLAMVLKCCSFLNDYVMGVQVHGILVKMGLESDMVSGSAVVDMYAKCKCLDHSLRFFNAMTDKNWVCWSAFIAGFVQNGRFFDSLEWFKEMQRHRVGVCQSTYASVFRSCAAVFALNLGSQLHAHALKTGFGTDKVVATATLDMYAKCHKFADSRKVFNSMPSPSLQSFNAMIIGYVQSEQGFEALKLFQRMKITGLCFDEISLSGVLMACAVTKELSAGCQLHGLAIKSNFWSNICVANAILDMYGKC

Click here to download the sequence:
Link to NCBI Protein BLAST