Transcript Information: S_Transcript_169982.p1


Annotated TAIR IDAT1G05460.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)SDE3
Annotation TypeOrtholog
Chromosome Positionchr1:1601357-1604658 | Reverse length=1002
E-Value1.1E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5651085527885
Replicate 21.5062948693886
Replicate 30.74067213187151
Condition 2: 8 Hour
Replicate 11.9698151698557
Replicate 22.2461695421412
Replicate 32.5681744102387
Condition 3: 24 Hour
Replicate 11.4914177483538
Replicate 21.274270530397
Replicate 31.3168135633193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_169982.p1 GENE.S_Transcript_169982~~S_Transcript_169982.p1 ORF type:5prime_partial len:249 (-),score=55.97,AAA_12|PF13087.2|8.1e-20 S_Transcript_169982:195-941(-)
GATGATATGTTTGATGTCAAGATTGGCAGTGTCGAACAGTTTCAAGGACAAGAAAGGGAAGTAATTATCATATCCACTGTCCGCTCGACTATCAAACATGATGAATTTGACAAAATCTATTATTTGGGATTCCTAAGCAATCCTAAAAGGTTCAATGTTTCCATTACTCGAGCTAAATCGTTGCTTGTCATTATTGGGAATCCACATATTATTTGTAAGGATAAATACTGGGCACAATTGTTATGGCGCTGTGTTGACAATGACTCTTATGAGGGGTGTTCTCTTCCTCAAAGGGAAAGCTATGATTACGATATTCCTGCACAGGAGTGTCATCATGCTGCTGATAAAGAGAATTTTGAGGTCAATGCCACGGCTGATCACAGTCAGGAGTTTTCTTGGGACGAATATAAGCCTGTTACGGGTGAAGATCATGGTAAACTTTCTTCTTGGGTGGAAAATAAACCTGTTAATGATCAATGTTTTTCCTGGGAAGAATCTAAACCTGTCCAGGAGGAAGATCAAGCTTATGATCACAGTTGTTCCTGGGAAGAATCTAAACCTGTCCAGGAGGAAGATCAAGCTTATGATCACAGTTGTTCCTGGGAAGAATCTAAACCTGTGAAGGAGGAAGATCAAGCTGATGAACGGGAAGATTTTAAACCTGTTGAGGGCAAAGATCAAGCTTATGAATGGGAAGATTTTAAACCTGTCAAGGATGAAGATGAGTGGTCTGATGGATGGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_169982.p1 GENE.S_Transcript_169982~~S_Transcript_169982.p1 ORF type:5prime_partial len:249 (-),score=55.97,AAA_12|PF13087.2|8.1e-20 S_Transcript_169982:195-941(-)
DDMFDVKIGSVEQFQGQEREVIIISTVRSTIKHDEFDKIYYLGFLSNPKRFNVSITRAKSLLVIIGNPHIICKDKYWAQLLWRCVDNDSYEGCSLPQRESYDYDIPAQECHHAADKENFEVNATADHSQEFSWDEYKPVTGEDHGKLSSWVENKPVNDQCFSWEESKPVQEEDQAYDHSCSWEESKPVQEEDQAYDHSCSWEESKPVKEEDQADEREDFKPVEGKDQAYEWEDFKPVKDEDEWSDGWK*

Click here to download the sequence:
Link to NCBI Protein BLAST