Transcript Information: S_Transcript_170072.p2


Annotated TAIR IDAT5G39570.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15844021-15845827 | Forward length=381
E-Value3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8456303291148
Replicate 23.443325537878
Replicate 35.0104543117296
Condition 2: 8 Hour
Replicate 16.5332120624743
Replicate 26.2072181196929
Replicate 34.9285196774523
Condition 3: 24 Hour
Replicate 14.0406720907457
Replicate 26.6812392508307
Replicate 33.0616354480199


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_170072.p2 GENE.S_Transcript_170072~~S_Transcript_170072.p2 ORF type:5prime_partial len:173 (-),score=62.30 S_Transcript_170072:147-665(-)
GGGAGGAGGACTGAGTATGAGACACCTAGCTCTGAGTATGGGTCTGGGTATGGGAGAAGGACGGAGTATGAGAATCCGACCTCGGAATATGGATCATCTGGGTATGGGAGGACTGAGTATGAGAATCCAACATCTGAATATGGTTCTGGATATGGGAGGAGGACTGAGTATGAGACACCTAGCTCTGAGTATGGGTCTGGGTATGGGAGAAGGACGGAGTATGAGAATCCGACCTCGGAATATGGATCATCTGGGTATGGGAGGACTGAGTATGAGAATCCAACATCTGAATATGGTTCTGGATATGGGAGGAGGACTGAGTATGAGGAGCCTAGTGCTGGTGGATATGGTGGGGCTTCTTATGGAAGGACTGGCTATGGTGGGAATGATGATGATGATGATAAGCCTCGTTATGGAGATGAGGGCTACGGCCGCAAGAAATATGGTGGTGATGATTCTGATGACGATGAGAAGAAGTGCTATCACCACAGGCACCACCACAAGCACTATGATGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_170072.p2 GENE.S_Transcript_170072~~S_Transcript_170072.p2 ORF type:5prime_partial len:173 (-),score=62.30 S_Transcript_170072:147-665(-)
GRRTEYETPSSEYGSGYGRRTEYENPTSEYGSSGYGRTEYENPTSEYGSGYGRRTEYETPSSEYGSGYGRRTEYENPTSEYGSSGYGRTEYENPTSEYGSGYGRRTEYEEPSAGGYGGASYGRTGYGGNDDDDDKPRYGDEGYGRKKYGGDDSDDDEKKCYHHRHHHKHYDD*

Click here to download the sequence:
Link to NCBI Protein BLAST