Transcript Information: S_Transcript_170111.p1


Annotated TAIR IDAT4G16360.3
Annotated Gene Name5'-AMP-activated protein kinase beta-2 subunit protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9245571-9246833 | Forward length=261
E-Value2E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 159.948317661254
Replicate 258.096134440376
Replicate 362.156487700439
Condition 2: 8 Hour
Replicate 165.230605675936
Replicate 269.670116871121
Replicate 365.570202494216
Condition 3: 24 Hour
Replicate 169.540805575594
Replicate 263.678252595135
Replicate 362.400559687398


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_170111.p1 GENE.S_Transcript_170111~~S_Transcript_170111.p1 ORF type:complete len:289 (+),score=86.85,AMPK1_CBM|PF16561.1|5.1e-32,AMPKBI|PF04739.11|6.3e-21 S_Transcript_170111:568-1434(+)
ATGGGGAATGTGAATGGTAGAGAAGATGGGATTGGAAGCCCATCTGGGTCTGGCTCTGGGCTTGTGGCTGAAGAGGAAGAAGAGGATGAGATTATTGGTGGCCCCATCGATGGTGATGTTGATGGTCCAACAGCTAGGATGATGGGTCACTCTCCTCCTCAAAGTCCTGTGGCTGCTCAATCTCCTCTGAAGTTCGGTCCTCAGAACCCTGTGGCTCCTATACAAAAACCTGAAGAGCTGCATATCATGAGTGAGTCTATGATGCACGCTACATCTCTGCCTGAAGATGTCAGTTTCGAGCAAGGAATTCCAACAATGATCACTTGGAGTTCTGGTGGGAAGGAGGTGGCTGTGGAGGGGTCATGGGATAATTGGAAGACAAGGAAACCTCTACAGAGATCAGGGAAGGACTTTACACTCATGAAGGTGCTTCCATCGGGAGTTTACCAGTATAGGTTTGTTGTTGATGGTTCATGGAGATATGCTCCAGATTCACCATGGACCCAAGACGAGAGTGGAAATATTTATAATGTTTTGGACTTGCAGGATTATGTACCGGAAGACACGGAGAGTATATCTGGGTTTGAGCCACCGCAATCTCCAGATTTTAGCTATGACAACACAGAACTAAGCCAAGACGATTTTGCCAAGGAGCCACCGCTTGTTCCTCCACACCTCCACATGACATTGCTTAATGTGCCTTCAACTGGCACAGAGATGCCTCCGCCTCAGTCAAGACCTCAACATGTGGTGCTCAACCATCTCTACATGCAGAAGGGAAAAAGCGGTCCGTCTGTGGTGGCACTTGGTGCTACACACCGGTTCAAGTCCAAGTATGTGACTGTTGTACTCTACAAGTCTCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_170111.p1 GENE.S_Transcript_170111~~S_Transcript_170111.p1 ORF type:complete len:289 (+),score=86.85,AMPK1_CBM|PF16561.1|5.1e-32,AMPKBI|PF04739.11|6.3e-21 S_Transcript_170111:568-1434(+)
MGNVNGREDGIGSPSGSGSGLVAEEEEEDEIIGGPIDGDVDGPTARMMGHSPPQSPVAAQSPLKFGPQNPVAPIQKPEELHIMSESMMHATSLPEDVSFEQGIPTMITWSSGGKEVAVEGSWDNWKTRKPLQRSGKDFTLMKVLPSGVYQYRFVVDGSWRYAPDSPWTQDESGNIYNVLDLQDYVPEDTESISGFEPPQSPDFSYDNTELSQDDFAKEPPLVPPHLHMTLLNVPSTGTEMPPPQSRPQHVVLNHLYMQKGKSGPSVVALGATHRFKSKYVTVVLYKSL*

Click here to download the sequence:
Link to NCBI Protein BLAST