Transcript Information: S_Transcript_17015.p1


Annotated TAIR IDAT2G31440.1
Annotated Gene NameINVOLVED IN: positive regulation of catalytic activity, protein processing; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aph-1 (InterPro:IPR009294); Has 268 Blast hits to 262 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:13399309-13400971 | Reverse length=250
E-Value2E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.185174432177
Replicate 210.551768918811
Replicate 312.161514373968
Condition 2: 8 Hour
Replicate 112.208013297489
Replicate 213.131302462448
Replicate 314.056102406183
Condition 3: 24 Hour
Replicate 18.0731091160891
Replicate 28.2115259334592
Replicate 37.859042821884


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17015.p1 GENE.S_Transcript_17015~~S_Transcript_17015.p1 ORF type:complete len:138 (+),score=29.92,Aph-1|PF06105.8|4e-30 S_Transcript_17015:195-608(+)
ATGCAAATTGCTCTAGCTGGTGGCTTAGGTCATGGTGTGGCTCATGCTGTGTTTTTCTGCCTTAGCCTTTTAACGCCTGCATTTGGACCTGCTACGTATTATGCTGAAAGTTGCAATTCGATGCCTTTCTTTCTTGTTTCTGCGGTTATTGCTCTTGCATTTGTTACCATTCATACCTTCTCAATGGTAATCGCCTTCAATGGATATGGAGAATCAAAGAAAATTGATCAGTATTTTGTTCCTATTGTTCACCTGATTGCTGCAATGCTGACTCTTGTTAATTTTGCTCCTGGTGGTTGCATCATTTCCATTCCCTTGCTGTATTTTATGGCTGCATTGACATTGATGCACTGTGGCAAGGTGGTGTTGAGAAGGTTAATCGAGGATCGAGGCAGAGAGGTTGATTCACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17015.p1 GENE.S_Transcript_17015~~S_Transcript_17015.p1 ORF type:complete len:138 (+),score=29.92,Aph-1|PF06105.8|4e-30 S_Transcript_17015:195-608(+)
MQIALAGGLGHGVAHAVFFCLSLLTPAFGPATYYAESCNSMPFFLVSAVIALAFVTIHTFSMVIAFNGYGESKKIDQYFVPIVHLIAAMLTLVNFAPGGCIISIPLLYFMAALTLMHCGKVVLRRLIEDRGREVDSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST