Transcript Information: S_Transcript_170173.p1


Annotated TAIR IDAT3G20475.1
Annotated Gene NameMUTS-Homologue 5
Annotated Gene Symbol(s)ATMSH5, MSH5
Annotation TypeOrtholog
Chromosome Positionchr3:7143546-7150811 | Forward length=807
E-Value1E-141
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5454486260665
Replicate 27.2697314250815
Replicate 36.500887814909
Condition 2: 8 Hour
Replicate 111.52061315983
Replicate 211.485929952963
Replicate 311.107108330565
Condition 3: 24 Hour
Replicate 17.9512028030898
Replicate 28.249280075682
Replicate 39.7602547314817


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_170173.p1 GENE.S_Transcript_170173~~S_Transcript_170173.p1 ORF type:3prime_partial len:261 (-),score=49.17,MutS_V|PF00488.17|4.8e-52 S_Transcript_170173:3-782(-)
ATGACAGTGGACACATTCATCCCGAATGACACAAAAATACTTGATGATGGAAGAATCAATATCATCACTGGTCCAAACTATTCTGGAAAAAGCATCTATATAAAGCAGGTGGCCTTGATTGTTTTCCTCTCTCACATCGGGAGTTTCGTACCTGCCGATTCTGCTGTGGTAGGATTAACTGATAGGATATTTTGTGCAATGGGAAGCAAGCTTCTGACTGCTGAACAATCAACATTTATGATTGATCTACATCAAGTGGGTATGATGTTGAGGCAAGCTACTTCACGGTCCTTATGCCTCTTGGATGAATTTGGTAAAGGTACGCTGACAGAGGATGGCATTGGTCTTCTTGGTGGAACTGTGAATTATTTTGCAGCCAGTGATGATCCACCAAAGGTTCTAGTTTGTACTCACTTGTCTGAAATATTTAATGCGGATTTGTTGCCAAAGTCTGAGAAAATCAAGTTTTACACCATGAGTGTGCTGAGACCTGAAGAAAGCAATATGCCGGTGGAGGACATTGTGTTTCTGTACAGATTAGTTCCAGGACAGGCACACCTAAGTTACGGGCTACATTGTGCGTTTCTTGCTGGCATCCCACATGCCGTGATAAAGAGGGCAGCAGTTATACTGGAAGCAACTGAAAACAATGAGCATGTTGAGCGACTCTCCAATGAGAATATAGCAAATCAAGATCAGCAATACAAGGATGCACTTGAAAAGATGTTGGCATTTGATACTAGGAACGGCAACCTCAACCTCTTCTTTCAAGATATCTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_170173.p1 GENE.S_Transcript_170173~~S_Transcript_170173.p1 ORF type:3prime_partial len:261 (-),score=49.17,MutS_V|PF00488.17|4.8e-52 S_Transcript_170173:3-782(-)
MTVDTFIPNDTKILDDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADSAVVGLTDRIFCAMGSKLLTAEQSTFMIDLHQVGMMLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTVNYFAASDDPPKVLVCTHLSEIFNADLLPKSEKIKFYTMSVLRPEESNMPVEDIVFLYRLVPGQAHLSYGLHCAFLAGIPHAVIKRAAVILEATENNEHVERLSNENIANQDQQYKDALEKMLAFDTRNGNLNLFFQDIF

Click here to download the sequence:
Link to NCBI Protein BLAST