Transcript Information: S_Transcript_170342.p1


Annotated TAIR IDAT3G11290.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits to 435 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3535766-3537295 | Reverse length=460
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6031928454928
Replicate 21.8607171915976
Replicate 32.6664196747374
Condition 2: 8 Hour
Replicate 11.5415944807566
Replicate 21.8867824153986
Replicate 31.0272697640955
Condition 3: 24 Hour
Replicate 11.5791482041393
Replicate 21.6383478247962
Replicate 32.7349204776632


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_170342.p1 GENE.S_Transcript_170342~~S_Transcript_170342.p1 ORF type:5prime_partial len:83 (+),score=7.08,Myb_DNA-bind_3|PF12776.3|8.6e-14 S_Transcript_170342:1-249(+)
AAAAAAGTTGTGCCAGAATTTGAGAAAAAGACTAAATTATCATGGGACAAACCAAGATTTAAAAACAAATTAGACAACTATAAGTCATCTTGGAGTCTTTGGAAGCAATTGCAAGGGAAGGAGACGGGATTAGGGTGGGATGCCGAAAAAGGAACACTAAGTGCTAGCGATGAATGGTGGGACTCAAAGATTAAGGTTAGTTTTTTTAAAAAAAAATTTGAAAATATTTTCCTTATGCTAAGAAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_170342.p1 GENE.S_Transcript_170342~~S_Transcript_170342.p1 ORF type:5prime_partial len:83 (+),score=7.08,Myb_DNA-bind_3|PF12776.3|8.6e-14 S_Transcript_170342:1-249(+)
KKVVPEFEKKTKLSWDKPRFKNKLDNYKSSWSLWKQLQGKETGLGWDAEKGTLSASDEWWDSKIKVSFFKKKFENIFLMLRN*

Click here to download the sequence:
Link to NCBI Protein BLAST