Transcript Information: S_Transcript_170452.p1


Annotated TAIR IDAT2G21090.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:9045695-9047488 | Reverse length=597
E-Value6E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68472558924135
Replicate 20.45412259809636
Replicate 30.44287873957188
Condition 2: 8 Hour
Replicate 11.5363059919719
Replicate 21.3047047234146
Replicate 31.5721808696641
Condition 3: 24 Hour
Replicate 10.37469783002734
Replicate 20.23324677437064
Replicate 30.47588763028521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_170452.p1 GENE.S_Transcript_170452~~S_Transcript_170452.p1 ORF type:complete len:583 (+),score=93.41,PPR|PF01535.16|4e+03,PPR|PF01535.16|7.1e-06,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|0.00035,PPR|PF01535.16|0.00014,PPR|PF01535.16|9e+02,PPR|PF01535.16|5.8e-06,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.00081,PPR|PF01535.16|0.65,PPR|PF01535.16|6.1e+02,PPR|PF01535.16|7.9e+02,PPR|PF01535.16|4.5e+02,PPR_2|PF13041.2|8.9e+02,PPR_2|PF13041.2|0.00072,PPR_2|PF13041.2|2.9e-06,PPR_2|PF13041.2|0.0095,PPR_2|PF13041.2|0.0056,PPR_2|PF13041.2|7.2e-10,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|9.2e-09,PPR_2|PF13041.2|0.00011,PPR_2|PF13041.2|7.4,PPR_2|PF13041.2|1e+04,PPR_2|PF13041.2|3.5e+02,PPR_1|PF12854.3|0.00036,PPR_1|PF12854.3|8.4e-05,PPR_1|PF12854.3|0.05,PPR_1|PF12854.3|0.0005,PPR_1|PF12854.3|4.7,PPR_1|PF12854.3|95,PPR_1|PF12854.3|1.7e-06,PPR_1|PF12854.3|0.00024,PPR_1|PF12854.3|8.4,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|3e+03,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.0069,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|0.64,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|18,PPR_3|PF13812.2|4e+02,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|62,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|9.4e+02 S_Transcript_170452:197-1945(+)
ATGGTAATGTTCCCTTGCCTACAAACCTGTGCTTCTCTGCTAGCACAGTGTATAGCAACCAGAGACCTCACCTTAGGCAAACCCCTTCATTCCCACTTCATAAAAACCTCCCTAATTTTCAACACCTTCATTTCTAACCGCCTTGTGGAATTCTACTCCAAATCCAACTCCATTCAATGTGCCCAGAAAGCTTTTGATGATCTTGCTGACAAAAACACACACTCCTGGAATGCACTGGTTTCTGGTTACTCCAAAAATGGGCTATTCCCCCTCGCACGCCAACTGCTCGATGAAATGCCTGAACCAGATATTGTCAGTTATAATTCTGTTATATCTGGCTTAAGCCGTCATGGGTTTTATAAAGAGTCTCTGGGTTTGTTCAAGAAGATGCAGAACATGTACAGTGAGCTGGTCCTTGATGAGTATACAGTTGTCAGTGCTGTGAGCAGTTGTGGGTTTCTTGGTTCAGTGCGGTTATTGCGACAACTTCATGGTATAGTTATTGTGCTCGGGTTACAGGTTGATGTTATTGTATGCAATGCTTTGATTGATGCCTATGGAAAATGTGGCCTGCCTGATTTATCTTACTCGATATTTGGTTGCATGGTTGAACGAGATGTTTTGTCATGGACTTCGATGGTGGCTGTCTTCAGCAGGGCGTCTAGATTGGAAGATGCTATTCGGATTTTTAATCAAATGCCAGTGAAGAATTCAGTATCTTGGACTGCAATCATTGCTGGGTTATCTCAAGGTGGGCGAGGAATGGAAGGTTTGTATCTCTTTAGTCAGATGCAGAAAGATGGAGTGCTGCCTAACACGTTTACATATGTAGCTGTGCTAGGAGCTTGCGCTGATTTAGCGCTCATTGAGAAGGGAAAACAACTTCATAGTCACATCATTAGATCGAGTACCAAGAGTCCTTTGTTGAATGTGTACATATACAATGCTTTGATCGACATGTATTGCAAGTGTGGAGATATGAGATCAGCAAGACTGTTGTTTGAGAGTTTGTCAGAGAAGGATATTGTTTCTTGGAACTCCATAATAACTGGGCTAGCTCAGAATGGCCTTAATGGAGAAGCAATTGAAACATTCGGAAGGATGATTGAAGCAAAAGTGAAGTCAAACGACATCACATTTCTCGCTGTACTGTCTGCTTGTAGCCATACAGGCCTGGTAGATGAAGGCATGAGGATTTTTGACATGATGGCAAAGCACGGTATGAAGCCAAGATCAGAGCATTATGCAATTCTAATTGACTTGCTCGGAAGGAAGAACAGACTCAATGAAGCTGTCAAGTTGATCAAGAGAGCTCCTGGTAGCTCTGATCATGTTGGAATGTGGGGCGCACTTTTAGGTGCTTGCCAGGTTCATGGTGACATGAATCTAGCTAGAAAGGCTGCAGAAATGCTCTTTCTGTTGGAGCCAAGCAACTCTGGTCGATATGTCATGCTATCAAATATATACGCGGCCAGTAAAAGATGGGATGATTCTCGTCAAGTGAGAAGAATCATGGGTGACAGAGGATTAAGGAAAGAAACAGCTTTTAGTTGGGTTGAAGTGAAAAACTCAAGACATGGATTTGTAGCCAAAGACACTTCCCACTTGCATACGGATCATATATATGAAGTAATTCATGGACTCTTCGATCAAATGAGGGAAGCTGGTTATAATCCTTGTGACAAGATAGGTGTTGAAGATGAAGAACTCTGGGATTACAATCTCAGTACTATAAATCAAACAACCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_170452.p1 GENE.S_Transcript_170452~~S_Transcript_170452.p1 ORF type:complete len:583 (+),score=93.41,PPR|PF01535.16|4e+03,PPR|PF01535.16|7.1e-06,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|0.00035,PPR|PF01535.16|0.00014,PPR|PF01535.16|9e+02,PPR|PF01535.16|5.8e-06,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.00081,PPR|PF01535.16|0.65,PPR|PF01535.16|6.1e+02,PPR|PF01535.16|7.9e+02,PPR|PF01535.16|4.5e+02,PPR_2|PF13041.2|8.9e+02,PPR_2|PF13041.2|0.00072,PPR_2|PF13041.2|2.9e-06,PPR_2|PF13041.2|0.0095,PPR_2|PF13041.2|0.0056,PPR_2|PF13041.2|7.2e-10,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|9.2e-09,PPR_2|PF13041.2|0.00011,PPR_2|PF13041.2|7.4,PPR_2|PF13041.2|1e+04,PPR_2|PF13041.2|3.5e+02,PPR_1|PF12854.3|0.00036,PPR_1|PF12854.3|8.4e-05,PPR_1|PF12854.3|0.05,PPR_1|PF12854.3|0.0005,PPR_1|PF12854.3|4.7,PPR_1|PF12854.3|95,PPR_1|PF12854.3|1.7e-06,PPR_1|PF12854.3|0.00024,PPR_1|PF12854.3|8.4,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|3e+03,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.0069,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|0.64,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|18,PPR_3|PF13812.2|4e+02,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|62,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|9.4e+02 S_Transcript_170452:197-1945(+)
MVMFPCLQTCASLLAQCIATRDLTLGKPLHSHFIKTSLIFNTFISNRLVEFYSKSNSIQCAQKAFDDLADKNTHSWNALVSGYSKNGLFPLARQLLDEMPEPDIVSYNSVISGLSRHGFYKESLGLFKKMQNMYSELVLDEYTVVSAVSSCGFLGSVRLLRQLHGIVIVLGLQVDVIVCNALIDAYGKCGLPDLSYSIFGCMVERDVLSWTSMVAVFSRASRLEDAIRIFNQMPVKNSVSWTAIIAGLSQGGRGMEGLYLFSQMQKDGVLPNTFTYVAVLGACADLALIEKGKQLHSHIIRSSTKSPLLNVYIYNALIDMYCKCGDMRSARLLFESLSEKDIVSWNSIITGLAQNGLNGEAIETFGRMIEAKVKSNDITFLAVLSACSHTGLVDEGMRIFDMMAKHGMKPRSEHYAILIDLLGRKNRLNEAVKLIKRAPGSSDHVGMWGALLGACQVHGDMNLARKAAEMLFLLEPSNSGRYVMLSNIYAASKRWDDSRQVRRIMGDRGLRKETAFSWVEVKNSRHGFVAKDTSHLHTDHIYEVIHGLFDQMREAGYNPCDKIGVEDEELWDYNLSTINQTT*

Click here to download the sequence:
Link to NCBI Protein BLAST