Transcript Information: S_Transcript_170551.p2


Annotated TAIR IDAT5G48770.1
Annotated Gene NameDisease resistance protein (TIR-NBS-LRR class) family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19773277-19777242 | Reverse length=1190
E-Value3.4E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.55443752573293
Replicate 21.5321381637163
Replicate 31.7930437859056
Condition 2: 8 Hour
Replicate 11.9252088480745
Replicate 22.1750408399734
Replicate 33.4046145480178
Condition 3: 24 Hour
Replicate 11.8204069575495
Replicate 21.8886509646956
Replicate 32.452143206053


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_170551.p2 GENE.S_Transcript_170551~~S_Transcript_170551.p2 ORF type:complete len:144 (+),score=15.00,TIR|PF01582.16|2.4e-24,TIR_2|PF13676.2|1.7e-17 S_Transcript_170551:237-668(+)
ATGAAGGAAGGATCCAAGTCATCGGATGCTAGTCATGCTACTCCACAAACGGAGCCGTATCTTCCCCCAGCAATGTTAGCAAAACGGGTAAACTGGGACGTGTTCTTAAGCTTCAGAGGGGAGGACACGCGTCACACGATCACAACGTCCCTCTACAGGGCCCTCCAAGAGAAAGGTGTACGTACGTTCATGGATGATGAAGGTATGGAGAGAGGGGATGTCATACAGCCAAGCCTAGAGGAGGCTATCGTGGATTCGGCTTTAGCTGTTGCCATCATATCTCCTAGATATGCTGACTCTCGGTGGTGCCTTCATGAACTTTCTAGAATCTTCGAGTGTAGGAAACGGGTCGTGCCCATTTCTACCGGGTTGACCCGTCGGATGTGCGGGGACAGAAAGGGGATTTTGGGAAGGAGTTTTGGAAACTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_170551.p2 GENE.S_Transcript_170551~~S_Transcript_170551.p2 ORF type:complete len:144 (+),score=15.00,TIR|PF01582.16|2.4e-24,TIR_2|PF13676.2|1.7e-17 S_Transcript_170551:237-668(+)
MKEGSKSSDASHATPQTEPYLPPAMLAKRVNWDVFLSFRGEDTRHTITTSLYRALQEKGVRTFMDDEGMERGDVIQPSLEEAIVDSALAVAIISPRYADSRWCLHELSRIFECRKRVVPISTGLTRRMCGDRKGILGRSFGNW*

Click here to download the sequence:
Link to NCBI Protein BLAST