Transcript Information: S_Transcript_170689.p1


Annotated TAIR IDAT5G54790.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22254195-22255489 | Reverse length=165
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62252634468258
Replicate 20.51608864462023
Replicate 30.647113546793
Condition 2: 8 Hour
Replicate 10.24941976979103
Replicate 20.13082952420893
Replicate 30.12465407956129
Condition 3: 24 Hour
Replicate 11.0219828533611
Replicate 21.0602952784256
Replicate 31.3274760213219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_170689.p1 GENE.S_Transcript_170689~~S_Transcript_170689.p1 ORF type:complete len:171 (+),score=28.26 S_Transcript_170689:883-1395(+)
ATGGATGACTCTTTGAGCTCCACAAACTACATGACAACATCTCTTTCCTCTAGGACCGGAGACGATAATTCGTCTCAACAGAGTAGTTGGACTCTGTACTTTGCAGACTTGATGATGAAGAATTGTAATGATCAGGAAGACAGTTTCTTTTGTTCTGACAGTAGTGCTTGTTCAGCTACAAGGAAAGACGATAACAGAAGCTGCTATTCGTTGCACAGGTGCCGTGACAAGTTGATCTCTAAACGGAGAAAACTCAAGGCAAAAACCTTCGTTGATCAGGACTTGGAGGACACTGCTACTTCACCTGTTCATAGTCCCAAGGTTAATGATTTTAGCTGCATGTATATGAAGTCGAAAGAGGTTGATGATCGAAGAGATGTTTGCCAGGAAAAAGAGCATGTTTCACAGAAGGTACAAGGCAGCATTGACATGGGGTTTTCAGATACAGAACTAAGAAGAAAGGGTTATTGTTTGGTTCCAATGTCAATGTTATTAAATTATTATGTCAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_170689.p1 GENE.S_Transcript_170689~~S_Transcript_170689.p1 ORF type:complete len:171 (+),score=28.26 S_Transcript_170689:883-1395(+)
MDDSLSSTNYMTTSLSSRTGDDNSSQQSSWTLYFADLMMKNCNDQEDSFFCSDSSACSATRKDDNRSCYSLHRCRDKLISKRRKLKAKTFVDQDLEDTATSPVHSPKVNDFSCMYMKSKEVDDRRDVCQEKEHVSQKVQGSIDMGFSDTELRRKGYCLVPMSMLLNYYVN*

Click here to download the sequence:
Link to NCBI Protein BLAST