Transcript Information: S_Transcript_170754.p1


Annotated TAIR IDAT1G49850.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18455326-18456444 | Reverse length=250
E-Value4E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5491380493468
Replicate 22.113294018919
Replicate 31.9078692500276
Condition 2: 8 Hour
Replicate 17.4352893442878
Replicate 27.6287146702516
Replicate 37.8403117627518
Condition 3: 24 Hour
Replicate 12.5946030199556
Replicate 22.1708631778111
Replicate 34.1553559747892


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_170754.p1 GENE.S_Transcript_170754~~S_Transcript_170754.p1 ORF type:complete len:261 (+),score=32.80,zf-RING_2|PF13639.2|1.2e-11,zf-RING_11|PF17123.1|1.1e-09 S_Transcript_170754:116-898(+)
ATGACAAATGCTACTTTCATATTCTATGGAAGAAGGTCTCGACCACTCAGAAGCTTCAATGATCTAGGTCTCCGTTCTTCTTCTTCTTCTCCTTCAACTTCTGATCCTAGCAGTAGTAACAGTTGTCACCGTCATCGGAATCGAAATACCGATCCTCGCCGCCGTAACCACCGCCGCAATGATGATTCCGACAACTCTCACCCCTCTCGCCCTCCTCCTCCTCTTCCGGCTAATGAACCGCAGCAGCGAGGCTCTCCTGGCGAAGCTCCCTCACGAAACCTTGTCAACAGGGAAGCTACACATGGCCTGAATAGAAGAACTGGTGAACGTGACAGGCTTCCTGGTGACGTATTGCTTGCCAGGGAAAGGCTTCTTCAAAGATTGAGAGGCGTATCTGTTTCTGAAGACAGGGACAGCCGGGAAACATCAGCCAGTGTTCATTGGGATGACTTCGGGCTGGTTGATGTGGATAGGGAAACCAGTGTTTCAAGAGAGCGGTCTAATGCCATTTCGAGTGAATTACCTTCACGAGAAGCAAAGAAGAAACCTCTGGGACTCTCTAAGGAGACCATTTATCAGTTGCAGCATGAGGTTTTCCAAGATTCCGAACTAGGTAACCCATTGTCAAAAGCATCAAAGGAATGCAGTATTTGTCTGGAGACCTTTGTGGAAGGTAACCAGCTCATACACCTGCATTGCGGACATCGATTTCATACAAAATGCCTGTATCCTTGGCTCCATAGTTGTGGGGAATGCCCATACTGTCGTACTTGTATTATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_170754.p1 GENE.S_Transcript_170754~~S_Transcript_170754.p1 ORF type:complete len:261 (+),score=32.80,zf-RING_2|PF13639.2|1.2e-11,zf-RING_11|PF17123.1|1.1e-09 S_Transcript_170754:116-898(+)
MTNATFIFYGRRSRPLRSFNDLGLRSSSSSPSTSDPSSSNSCHRHRNRNTDPRRRNHRRNDDSDNSHPSRPPPPLPANEPQQRGSPGEAPSRNLVNREATHGLNRRTGERDRLPGDVLLARERLLQRLRGVSVSEDRDSRETSASVHWDDFGLVDVDRETSVSRERSNAISSELPSREAKKKPLGLSKETIYQLQHEVFQDSELGNPLSKASKECSICLETFVEGNQLIHLHCGHRFHTKCLYPWLHSCGECPYCRTCII*

Click here to download the sequence:
Link to NCBI Protein BLAST