Transcript Information: S_Transcript_170832.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value4E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3458542015328
Replicate 23.5070908256165
Replicate 34.1842623773487
Condition 2: 8 Hour
Replicate 10.73960891273294
Replicate 21.0345363532822
Replicate 31.0473104314586
Condition 3: 24 Hour
Replicate 16.5029566460439
Replicate 24.2249012909665
Replicate 34.3373168846948


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_170832.p1 GENE.S_Transcript_170832~~S_Transcript_170832.p1 ORF type:complete len:692 (+),score=93.72,RVT_1|PF00078.23|5.2e-31,zf-RVT|PF13966.2|7.1e-14,zf-RVT|PF13966.2|1.6e+04 S_Transcript_170832:488-2563(+)
ATGGCTTATTTGATCAAAAAAGCCTCAAAAAAGAAGCACATCCTCTCCCTTAAAGCTGACTTAACCAAGGCCTTTGATAGTTTGGAATGGGACTTCATCAGGGACACCCTCTGTGGATTTGGGTTCCCTCCGAAATTCACAAGATTGATCATGTCCTGTGTCTCATCGGCTAAAATCTCTGTGCTTTGGAATGGGGAAATCACGGAGTCTTTCCTCCCTTCCAGGGGCATTCGGCAAGGAGACCCCCTTTCGCCATACATTTTTGTGCTGTGCATGGACCGCTTATCTCAGATGATTGAGTCGAGAGTGTCTAGTGGAGGCTATATTCCTGTTTCGATTGATCAAAGCCTCAAAATCTCTCATATCTTCTATGCGGATGATGTCCTCCTGTTTGGCAGAGCTACTCCATCCAATGTGGAGGCCATGACTGCTGTCCTGGATAATTTTGGGGAAGCTTCAGGTCTTGTCATAAAAAAAGCTAAATCCAAGCTCATTTTTCCACCTTCTATGCACCATCGGTTTCGGCGTCTTATTGCTGGAGCTTGTGGAATCCCAGGTAGTACTTCGTTTGGTACCTATCTTGGCCTCCCCATCTCTGCGAATTCTCTTAAAGTCAAAGATTTTCATTTCCTCCTTGATAAGGTTAAAGCTAGGCTTCAGGGTTGGCAAGGGCAATTTCTCAATTTGGCAGGCAAATGTACCCTGATTAAATCAGCTTTGAGCTCTCTTCCTGCTTACACCATGCAGGTCACTAAGCTCCCTACCACTGTTACGGATTCCCTTAAGAAATCCATGCGTCGGTTCCTCTGGGGCAAGTCTAACTCCTCGCGTTTCTTGGCCAGGATTGGGTGGGATGAAGTTTGTAAACCTTTATCTATTGGGGGTCTAGGGATTAGGAGGCTAAAGGATTGGAATCTTGCCTTTCTTGCCAAGCTTGCTTGGAGATTTTTGGTGGAAGGAAATCGACTTTGGGTTAGAGTTCTCAAGGCTCGATATTTGAAGAACAGCTCCTTTCTTAGTGCCTTGGTTCCTTACACATCCTCTCATGTTTGGAGGGTTATTCTCACTGGCAAAGAGAAGCTTCTCGAGGGTCTTAAGGTGCGAATTGGAAATGGGTTTGATACTTCTCTCTGGTATGATTGGTGGGTTGGGGATAAGCCCCTTGTGCACTATCTGAGTGGGGATATTCCCCCGCTTCTTGCCAATTGGCGTGTAGCCCATATCATTACCAATGGCTCCTGGAATTTGTCTCGTATTTCTCACCTTTTTTCCCCTGAAATCATTCACCTTATTCAGTGCACTCCTCTTTCCTTTAGTTCCTCTGCTTCGGATGCCTTGAGATGGGGTCTTTCAGCGCAGGGTGTTATTACTGTTAAATCCGTGTACAACCAGCTCTCCCCTATTAGAACTGCTAGGCGTCCCTTCATCCCCTGGAAGAAAATCTGGGGGCTTAGTGTTCCGTTGAAAATGCGCATGCTGATTTGGAACTTAGCCCATGATATTCTGCCAACCGCACTTTTTCTCAGCCTTAGGATCCCCAATTTCAACCCTCACTGCATTTTCTGTTATGGTCCTACGGAGGATTCCCTTCACCTCTTTCGGGATTGCCCATTTGCTTCCTCGGTTTGGTCTCTCCTCTTCCAGGGTGACGCCTCTCTTGATTTCCACAGATTCTTTAATTACAATTGGGCAGAGTGGCTTTCTTATAATTTGAGCCTTGATAAGGCTTGGTGCTCCAAATTCTCTATTATTTTATGGCACCTCTGGTGCGCTAGGAATAAGAAGATTTTCCAGGATGCTAACATTACACCTTGGTGGGTTTTCTCCTGCATTTGCCATGATTTCTCTATGGTTTCTTTGTCTGAGCAGGTTGGTGGGCGCTCTGCCATTTCGCGGGAACCCTATTTTGCTTGGAAGCCCCCCATCGGAGATGTCCTCAAGCTGAACGTCGATGGCTCCGTCAGGAAGCGCCCCCCAGAAGCTGCTGGAGGGGGGTCATTAGGGACTCTGCAGGTCAGTGGATCTATGGCTTCGCAGCCCGCTTTGACACTACTATTGTGGCCTCTGAGGTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_170832.p1 GENE.S_Transcript_170832~~S_Transcript_170832.p1 ORF type:complete len:692 (+),score=93.72,RVT_1|PF00078.23|5.2e-31,zf-RVT|PF13966.2|7.1e-14,zf-RVT|PF13966.2|1.6e+04 S_Transcript_170832:488-2563(+)
MAYLIKKASKKKHILSLKADLTKAFDSLEWDFIRDTLCGFGFPPKFTRLIMSCVSSAKISVLWNGEITESFLPSRGIRQGDPLSPYIFVLCMDRLSQMIESRVSSGGYIPVSIDQSLKISHIFYADDVLLFGRATPSNVEAMTAVLDNFGEASGLVIKKAKSKLIFPPSMHHRFRRLIAGACGIPGSTSFGTYLGLPISANSLKVKDFHFLLDKVKARLQGWQGQFLNLAGKCTLIKSALSSLPAYTMQVTKLPTTVTDSLKKSMRRFLWGKSNSSRFLARIGWDEVCKPLSIGGLGIRRLKDWNLAFLAKLAWRFLVEGNRLWVRVLKARYLKNSSFLSALVPYTSSHVWRVILTGKEKLLEGLKVRIGNGFDTSLWYDWWVGDKPLVHYLSGDIPPLLANWRVAHIITNGSWNLSRISHLFSPEIIHLIQCTPLSFSSSASDALRWGLSAQGVITVKSVYNQLSPIRTARRPFIPWKKIWGLSVPLKMRMLIWNLAHDILPTALFLSLRIPNFNPHCIFCYGPTEDSLHLFRDCPFASSVWSLLFQGDASLDFHRFFNYNWAEWLSYNLSLDKAWCSKFSIILWHLWCARNKKIFQDANITPWWVFSCICHDFSMVSLSEQVGGRSAISREPYFAWKPPIGDVLKLNVDGSVRKRPPEAAGGGSLGTLQVSGSMASQPALTLLLWPLRS*

Click here to download the sequence:
Link to NCBI Protein BLAST