Transcript Information: S_Transcript_170860.p1


Annotated TAIR IDAT3G48200.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 210 Blast hits to 148 proteins in 42 species: Archae - 0; Bacteria - 118; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17832949-17837371 | Reverse length=1088
E-Value7E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.80645458288426
Replicate 20.22285646017692
Replicate 30
Condition 2: 8 Hour
Replicate 11.5078558810094
Replicate 21.1298913454407
Replicate 30.43062318393902
Condition 3: 24 Hour
Replicate 10.66196616638164
Replicate 20.9157095586403
Replicate 31.0190725012168


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_170860.p1 GENE.S_Transcript_170860~~S_Transcript_170860.p1 ORF type:internal len:99 (-),score=8.38 S_Transcript_170860:2-295(-)
GGCAGTTTCGAGAAGGCTGGAGTAGTATATGGTGCGCCACTAACTGCTATGGAATACCAAACATATTTTGAGGTCAGTAGTACTTGTACTTTCTCCCCTCAAAACTCATCTTTATTAGATAGTAACGCTTTCTTTTCCTCTCGCTATCTCGGTGTCTTAAGATGTGTTCTATTCTTCCAGAGTCAAAATTATATCCCAGAAGCAGAATATATTGCAGATCCTGAAAGTTCAACTGGATGGAGGAGTTTCGAAAGGAGTATGTTTTGGTTAGTGGTAATTGCTGGCAGCTTGGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_170860.p1 GENE.S_Transcript_170860~~S_Transcript_170860.p1 ORF type:internal len:99 (-),score=8.38 S_Transcript_170860:2-295(-)
GSFEKAGVVYGAPLTAMEYQTYFEVSSTCTFSPQNSSLLDSNAFFSSRYLGVLRCVLFFQSQNYIPEAEYIADPESSTGWRSFERSMFWLVVIAGSLV

Click here to download the sequence:
Link to NCBI Protein BLAST