Transcript Information: S_Transcript_170927.p1


Annotated TAIR IDAT1G31840.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:11424006-11426528 | Forward length=840
E-Value2E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51843508899702
Replicate 20
Replicate 30.17963703977533
Condition 2: 8 Hour
Replicate 10.62314452225389
Replicate 20.65372284986214
Replicate 30.89969486644402
Condition 3: 24 Hour
Replicate 10.14184989279607
Replicate 21.1037570572897
Replicate 30.49133852737239


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_170927.p1 GENE.S_Transcript_170927~~S_Transcript_170927.p1 ORF type:internal len:308 (-),score=36.81,PPR_2|PF13041.2|0.026,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|1.9e-12,PPR_2|PF13041.2|1.9e-11,PPR_2|PF13041.2|9.5e-06,PPR_2|PF13041.2|5.9e-11,PPR_2|PF13041.2|2.6e-05,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|0.018,PPR_1|PF12854.3|0.36,PPR_1|PF12854.3|0.24,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|6.9e-07,PPR_1|PF12854.3|1.6e-06,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|0.044,PPR|PF01535.16|0.00058,PPR|PF01535.16|0.00079,PPR|PF01535.16|0.00042,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|0.0002,PPR|PF01535.16|0.00011,PPR|PF01535.16|5.5,PPR|PF01535.16|9.8e-05,PPR|PF01535.16|0.97,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|6.1,PPR_3|PF13812.2|0.0042,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.008,PPR_3|PF13812.2|6,MRP-S27|PF10037.5|1.4,MRP-S27|PF10037.5|0.0069,MRP-S27|PF10037.5|0.034 S_Transcript_170927:2-922(-)
ATTGTATATAGCATTCTTGTAGATGGCCTTTTGAAGAATGGAAAGTTGGAGGAAGGCTATATCCTCTTGTCTGAGGCTTTACGGAAGGGCATCATGTTGGATGCTATCATTTTTGGCTCGATTATGGATTCATATGTGAGGGTAGGAGATTTGGGAAAGGTGATAGAGGTGTACAATAGAATGTGTAGGGTAGGTATCTCTCCTAGTGTAGTCAATTATGGCATTCTTATAAAGGGTTTGTGTCAACATGGTCGTGTTATTGCGGCTAGTGGAGTTTTTGGTGATCTTTTGAAGCACGGTTTGGACCCTTCTGTATCAACTTACAGTTGTCTTATTGATGGGTTCAGCAAATTGGGAAATTTGGAAGATGCATTTAGATGGTACAGAATGATGTTCCGGTGTGGTTATGTTCCTGATCTTGTCATCTATTCGATACTTGTTAATGGGTTTAGCAAGAAAGGGCATGTAAAGAAAGCACTTCAGATATTCTTCCAGGCCAAAATGATTGGTATACAACCTAACGTACATATTTTCAATACCTTGATAGATGGCTATTGTAGATTGAATCAAACGGGGGACATGATGAAGGTGTACAGTTTTATGCAAACGCATAACATAATTCCAGATGCAGTAACCCACAGTTTGTTTTTTAAAGCACTGATTGCGCAGGGGAAACTCAACATGGCATTGGCACTCTTCTTTCAATTGCTTAAGCAAGGTCTGTCTTTGGATTCCATTGCATATTGCATGCTGATTGACGCCTTTTGCAGGCAAAACAAACTCGAATCTGTATTATGGCTTTTCCAGCTAATGCTAAGGCATCAGTTGAAACCTGATATTACCTTGTACAATGTTCTCCTTAAAAGTCTGTTCAAAGATTGCCGGCTCGAAGATGCAGGAAACCTTTTCCAGCAACTTCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_170927.p1 GENE.S_Transcript_170927~~S_Transcript_170927.p1 ORF type:internal len:308 (-),score=36.81,PPR_2|PF13041.2|0.026,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|1.9e-12,PPR_2|PF13041.2|1.9e-11,PPR_2|PF13041.2|9.5e-06,PPR_2|PF13041.2|5.9e-11,PPR_2|PF13041.2|2.6e-05,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|0.018,PPR_1|PF12854.3|0.36,PPR_1|PF12854.3|0.24,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|6.9e-07,PPR_1|PF12854.3|1.6e-06,PPR_1|PF12854.3|8.3e+02,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|0.044,PPR|PF01535.16|0.00058,PPR|PF01535.16|0.00079,PPR|PF01535.16|0.00042,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|0.0002,PPR|PF01535.16|0.00011,PPR|PF01535.16|5.5,PPR|PF01535.16|9.8e-05,PPR|PF01535.16|0.97,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|6.1,PPR_3|PF13812.2|0.0042,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.008,PPR_3|PF13812.2|6,MRP-S27|PF10037.5|1.4,MRP-S27|PF10037.5|0.0069,MRP-S27|PF10037.5|0.034 S_Transcript_170927:2-922(-)
IVYSILVDGLLKNGKLEEGYILLSEALRKGIMLDAIIFGSIMDSYVRVGDLGKVIEVYNRMCRVGISPSVVNYGILIKGLCQHGRVIAASGVFGDLLKHGLDPSVSTYSCLIDGFSKLGNLEDAFRWYRMMFRCGYVPDLVIYSILVNGFSKKGHVKKALQIFFQAKMIGIQPNVHIFNTLIDGYCRLNQTGDMMKVYSFMQTHNIIPDAVTHSLFFKALIAQGKLNMALALFFQLLKQGLSLDSIAYCMLIDAFCRQNKLESVLWLFQLMLRHQLKPDITLYNVLLKSLFKDCRLEDAGNLFQQLL

Click here to download the sequence:
Link to NCBI Protein BLAST