Transcript Information: S_Transcript_171086.p1


Annotated TAIR IDAT5G04220.2
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTC, ATSYTC, NTMC2TYPE1.3, NTMC2T1.3, SYT3
Annotation TypeOrtholog
Chromosome Positionchr5:1155985-1158620 | Reverse length=540
E-Value9.4E-246
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.325314130165
Replicate 231.51827079645
Replicate 326.92099021727
Condition 2: 8 Hour
Replicate 123.864127259649
Replicate 222.207952312696
Replicate 326.273929373906
Condition 3: 24 Hour
Replicate 139.608854680748
Replicate 228.807115813159
Replicate 331.181098852479


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171086.p1 GENE.S_Transcript_171086~~S_Transcript_171086.p1 ORF type:complete len:546 (+),score=100.33,C2|PF00168.26|3.2e-23,C2|PF00168.26|4.6e-16,SMP_LBD|PF17047.1|2e-16 S_Transcript_171086:182-1819(+)
ATGGGATTTGTAAGTACTTTGTTAGGAATTCTGGGTTTTGGCATTGGGCTCCCTTTTGGGCTCTTTGTGGGGTTTTTCTTTCTTGTGTATTCCAAGCCTAAAGAGGTCAAGGAGCCAGAAATTACGCCACTTCATGAATTGGATACAAGTGCTCTGCAAGAACTTCTTCCTGAGATGCCGAATTGGATCAAAAGTCCTGATTATGAGCGAGTTGATTGGCTAAACAAGTACATATTGGATATGTGGCCTTTTCTTGATAAGGCTATTTGCAACACAATTAGAAGCACAGTAAAACCTATAGTTGCAGATTACATTGGAAAATATCAGATAAAGGCCATTGAGTTTGAGAAACTAAGTCTTGGAACTCTGCCACCCGTCTTTCACGGTATGAAAGTTTATGAAACCAATGAGAACCAACTAGTCTTGGAGCCTGCAATTAAATGGGCAGGAAATCCCAACATTGTCGTAGCTGTGACATTGATGTCTGTACAGATCAGATTTCAGCTTGTGGATCTACAGGTATTTGTTACTCCGAGGGTACACTTGAAACCCCTTGTTCCAAGCTTTCCATGTTTTGCGAGCATAGTTGTCTCATTAATCGAAAAGCCACATGTAGATTTTGGATTGAAAGTTCTGGGAGGAGATGTTATGTCCATACCTGGTCTTTATCGCTTTGTTCAGGAAACTATCAAGAAACAAGTTGCTAATCTCTACCACTGGCCTCAATTTCTTGAAATTCCCATTCTCGATACTTCAACAGTGGCTGTCCAGAAACCAGTTGGCATATTACATGTAAACATTGTACGTGCAATGAATCTTTTGAAGATGGACTTTATAGGGGCATCTGATCCTTATGTCAAGTTAAAGCTTAGTGGTGAAAAGCTGCCTGCAAAGAAAACATCAATCAAGAGGAGGAATCTGAATCCAGAGTGGAATGAAAAGTTTAAGCTCATTATCAAGGATCCAGAAACCCAAGTTCTTGAACTGCATGTGTTCGACTGGGACAAGGTTGGAGGACATGATAACTTGGGGGTGCAACTAGTTCCTTTGAAGCAGCTTAGTCCCCATGAAACAAAGGAATTCACATTAGATTTGCTTAAGAGTTTTAATATGAAGGATCCACATAATAAGAAGCCACGAGGGCAGCTTGTGTTGGAACTTACCTTCGATCCGTTCAAGGATGAGAGTGATGGCTTCACCGAAGGGGATGAACTGCAGAGGAAACAAAGTAGCATAGCAAGAGAAATAGCAGAAGCATCAATGAGTGAAGGGGCACTTTTGGTTACAGTCATAGAAGCCGAGGATCTAGAGGCCGGGGAGCATCGGATTAACCCATATGCTCAAATTTTATTCAGAGGAGAGCAAAAGAGGACAAAGAGAATAAGGAAGAGTCGTAGTCCACGATGGAATGAACAATTCGTATTTATGCTTGACGAGCCACCTTTGGAGGATAAGATGCATATTGAAGTCTTCAGCTCACGTAGAACATTTCGTTTGATTAGGCAGAGAGAATCGCTTGGATTTGTGGATATTAATCTGGCTGACGTTGTGAACAATGGAAGAATCAACGAAAAGTATTATCTGATCGAGTCGAGGAATGGGAAGCTGCAAGTTGAGTTAGAATGGCAGACTACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171086.p1 GENE.S_Transcript_171086~~S_Transcript_171086.p1 ORF type:complete len:546 (+),score=100.33,C2|PF00168.26|3.2e-23,C2|PF00168.26|4.6e-16,SMP_LBD|PF17047.1|2e-16 S_Transcript_171086:182-1819(+)
MGFVSTLLGILGFGIGLPFGLFVGFFFLVYSKPKEVKEPEITPLHELDTSALQELLPEMPNWIKSPDYERVDWLNKYILDMWPFLDKAICNTIRSTVKPIVADYIGKYQIKAIEFEKLSLGTLPPVFHGMKVYETNENQLVLEPAIKWAGNPNIVVAVTLMSVQIRFQLVDLQVFVTPRVHLKPLVPSFPCFASIVVSLIEKPHVDFGLKVLGGDVMSIPGLYRFVQETIKKQVANLYHWPQFLEIPILDTSTVAVQKPVGILHVNIVRAMNLLKMDFIGASDPYVKLKLSGEKLPAKKTSIKRRNLNPEWNEKFKLIIKDPETQVLELHVFDWDKVGGHDNLGVQLVPLKQLSPHETKEFTLDLLKSFNMKDPHNKKPRGQLVLELTFDPFKDESDGFTEGDELQRKQSSIAREIAEASMSEGALLVTVIEAEDLEAGEHRINPYAQILFRGEQKRTKRIRKSRSPRWNEQFVFMLDEPPLEDKMHIEVFSSRRTFRLIRQRESLGFVDINLADVVNNGRINEKYYLIESRNGKLQVELEWQTT*

Click here to download the sequence:
Link to NCBI Protein BLAST