Transcript Information: S_Transcript_171089.p1


Annotated TAIR IDAT5G04220.2
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTC, ATSYTC, NTMC2TYPE1.3, NTMC2T1.3, SYT3
Annotation TypeHomolog
Chromosome Positionchr5:1155985-1158620 | Reverse length=540
E-Value1E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.42265880378381
Replicate 30.21198547222529
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.57168939936732
Condition 3: 24 Hour
Replicate 10
Replicate 20.17366905422488
Replicate 30.57981711276129


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171089.p1 GENE.S_Transcript_171089~~S_Transcript_171089.p1 ORF type:complete len:261 (+),score=53.66,C2|PF00168.26|6.5e-20,C2|PF00168.26|1.1e-13 S_Transcript_171089:1203-1985(+)
ATGAATCTTTTGAAGATGGACTTTATAGGGGCATCTGATCCTTATGTCAAGTTAAAGCTTAGTGGTGAAAAGCTGCCTGCAAAGAAAACATCAATCAAGAGGAGGAATCTGAATCCAGAGTGGAATGAAAAGTTTAAGCTCATTATCAAGGATCCAGAAACCCAAGTTCTTGAACTGCATGTGTTCGACTGGGACAAGGTTGGAGGACATGATAACTTGGGGGTGCAACTAGTTCCTTTGAAGCAGCTTAGTCCCCATGAAACAAAGGAATTCACATTAGATTTGCTTAAGAGTTTTAATATGAAGGATCCACATAATAAGAAGCCACGAGGGCAGCTTGTGTTGGAACTTACCTTCGATCCGTTCAAGGATGAGAGTGATGGCTTCACCGAAGGGGATGAACTGCAGAGGAAACAAAGTAGCATAGCAAGAGAAATAGCAGAAGCATCAATGAGTGAAGGGGCACTTTTGGTTACAGTCATAGAAGCCGAGGATCTAGAGGCCGGGGAGCATCGGATTAACCCATATGCTCAAATTTTATTCAGAGGAGAGCAAAAGAGGACAAAGAGAATAAGGAAGAGTCGTAGTCCACGATGGAATGAACAATTCGTATTTATGCTTGACGAGCCACCTTTGGAGGATAAGATGCATATTGAAGTCTTCAGCTCACGTAGAACATTTCGTTTGATTAGGCAGAGAGTATGTTACTATCTCTTTGATGGTGCACCCCCCTTACTCTTATTCCAAAGAGTTTGCATCATAAAGTTTGCTTGTTTTGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171089.p1 GENE.S_Transcript_171089~~S_Transcript_171089.p1 ORF type:complete len:261 (+),score=53.66,C2|PF00168.26|6.5e-20,C2|PF00168.26|1.1e-13 S_Transcript_171089:1203-1985(+)
MNLLKMDFIGASDPYVKLKLSGEKLPAKKTSIKRRNLNPEWNEKFKLIIKDPETQVLELHVFDWDKVGGHDNLGVQLVPLKQLSPHETKEFTLDLLKSFNMKDPHNKKPRGQLVLELTFDPFKDESDGFTEGDELQRKQSSIAREIAEASMSEGALLVTVIEAEDLEAGEHRINPYAQILFRGEQKRTKRIRKSRSPRWNEQFVFMLDEPPLEDKMHIEVFSSRRTFRLIRQRVCYYLFDGAPPLLLFQRVCIIKFACFA*

Click here to download the sequence:
Link to NCBI Protein BLAST