Transcript Information: S_Transcript_171092.p1


Annotated TAIR IDAT1G20080.1
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTB, ATSYTB, NTMC2TYPE1.2, NTMC2T1.2, SYT2
Annotation TypeHomolog
Chromosome Positionchr1:6962236-6964912 | Forward length=537
E-Value2E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.256964947418
Replicate 219.600424651542
Replicate 313.173382916858
Condition 2: 8 Hour
Replicate 111.138708335288
Replicate 28.689066212751
Replicate 38.8498831574253
Condition 3: 24 Hour
Replicate 115.213401002378
Replicate 212.849571741947
Replicate 313.962203152832


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171092.p1 GENE.S_Transcript_171092~~S_Transcript_171092.p1 ORF type:complete len:224 (-),score=39.63,C2|PF00168.26|1e+03,C2|PF00168.26|8e-17 S_Transcript_171092:518-1189(-)
ATGATATTTCCCTGTTCTTTTTGTCGTCGTGTTTGTGTGCAGGTTGGAGGACATGATAACTTGGGGGTGCAACTAGTTCCTTTGAAGCAGCTTAGTCCCCATGAAACAAAGGAATTCACATTAGATTTGCTTAAGAGTTTTAATATGAAGGATCCACATAATAAGAAGCCACGAGGGCAGCTTGTGTTGGAACTTACCTTCGATCCGTTCAAGGATGAGAGTGATGGCTTCACCGAAGGGGATGAACTGCAGAGGAAACAAAGTAGCATAGCAAGAGAAATAGCAGAAGCATCAATGAGTGAAGGGGCACTTTTGGTTACAGTCATAGAAGCCGAGGATCTAGAGGCCGGGGAGCATCGGATCAACCCATATGCTCAAATTTTATTCAGAGGAGAGCAAAAGAGGACAAAGAGAATAAGGAAGAGTCGTAGTCCACGATGGAATGAACAATTCGTATTTATGCTTGACGAGCCACCTTTGGAGGATAAGATGCATATTGAAGTCTTCAGCTCACGTAGAACATTTCGTTTGATTAGGCAGAGAGAATCGCTTGGATTTGTGGATATTAATCTGGCTGACGTTGTGAACAATGGAAGAATCAACGAAAAGTATTATCTGATCGAGTCGAGGAATGGGAAGCTGCAAGTTGAGTTAGAATGGCAGACTACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171092.p1 GENE.S_Transcript_171092~~S_Transcript_171092.p1 ORF type:complete len:224 (-),score=39.63,C2|PF00168.26|1e+03,C2|PF00168.26|8e-17 S_Transcript_171092:518-1189(-)
MIFPCSFCRRVCVQVGGHDNLGVQLVPLKQLSPHETKEFTLDLLKSFNMKDPHNKKPRGQLVLELTFDPFKDESDGFTEGDELQRKQSSIAREIAEASMSEGALLVTVIEAEDLEAGEHRINPYAQILFRGEQKRTKRIRKSRSPRWNEQFVFMLDEPPLEDKMHIEVFSSRRTFRLIRQRESLGFVDINLADVVNNGRINEKYYLIESRNGKLQVELEWQTT*

Click here to download the sequence:
Link to NCBI Protein BLAST