Transcript Information: S_Transcript_171159.p1


Annotated TAIR IDAT1G12530.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits to 53 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4269122-4270771 | Reverse length=193
E-Value4.9E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.063739962883
Replicate 26.7671581415907
Replicate 36.664181946175
Condition 2: 8 Hour
Replicate 16.8993909849548
Replicate 27.1439516664673
Replicate 37.1649907915904
Condition 3: 24 Hour
Replicate 16.6085361820285
Replicate 26.0944703398581
Replicate 35.9345986835567


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171159.p1 GENE.S_Transcript_171159~~S_Transcript_171159.p1 ORF type:complete len:238 (+),score=57.44 S_Transcript_171159:122-835(+)
ATGGGAAGAAATCAGAACATCACTGCTGAAAAAGTGATTACCAAGATCAAAGATGACGGTGATTTTGACCGCCTTCGTCTCAAGATCATCCGTCTACTCAAACAAAACGAGGATTTGCGTAACAGTATCATTTCAGTTGTTAAGCAGTCTGCAGCACTTAATAGTGATGGCGCAGAAAATATGAAACCCAGGCAACTCTGTGATAAAATCCATGATGAGGTTCGTGAAAAAGTGATGAGCCAAATCTCTGATGATCTGTGGAGGATTATACGATCAGGTGACGGCATGAAAAATGAAATAACAGAGACGGTGCAAGCAATATATGATAAACTACTGAACCCAAAGGAAAAAGCAGAGGCTGAATTCCCAAGTTCCTCAGGTCAAGTTCCAGAAAGGAAAGGAGCCGATTCTAATGGTGCTGTCATGGTTTCGGGAGAAAGCAGTGGTACATTGTCTGACAGAAAGCCTCCAGGATTCTCCCTGCACAATCATGTTGGCAGTAATCTTGATAGTTCTCGATCTGAGGCACAGCAACGTGGTCCTAATGGTAGCAGACCCCTGGAACTGGGGAGAGAACCTCATCGGTCAAATGGTTCATTGAAGACTGAAAATGGTAACAACAGTCCACCCCCTCACTCTAAATCACGTGGGAAACGAAAACATCCTTCCGAGGGCAGTGATGAAGACCCTGATATTCCACCAGGGTTCGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171159.p1 GENE.S_Transcript_171159~~S_Transcript_171159.p1 ORF type:complete len:238 (+),score=57.44 S_Transcript_171159:122-835(+)
MGRNQNITAEKVITKIKDDGDFDRLRLKIIRLLKQNEDLRNSIISVVKQSAALNSDGAENMKPRQLCDKIHDEVREKVMSQISDDLWRIIRSGDGMKNEITETVQAIYDKLLNPKEKAEAEFPSSSGQVPERKGADSNGAVMVSGESSGTLSDRKPPGFSLHNHVGSNLDSSRSEAQQRGPNGSRPLELGREPHRSNGSLKTENGNNSPPPHSKSRGKRKHPSEGSDEDPDIPPGFG*

Click here to download the sequence:
Link to NCBI Protein BLAST