Transcript Information: S_Transcript_1712.p1


Annotated TAIR IDAT3G48010.1
Annotated Gene Namecyclic nucleotide-gated channel 16
Annotated Gene Symbol(s)ATCNGC16, CNGC16
Annotation TypeHomolog
Chromosome Positionchr3:17721335-17724028 | Reverse length=705
E-Value9E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2618233344267
Replicate 21.9970628478785
Replicate 31.7488801458587
Condition 2: 8 Hour
Replicate 12.849513361341
Replicate 22.700050697898
Replicate 32.6644809506227
Condition 3: 24 Hour
Replicate 12.5422924751985
Replicate 21.172266116018
Replicate 33.0440398419968


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_1712.p1 GENE.S_Transcript_1712~~S_Transcript_1712.p1 ORF type:complete len:232 (+),score=16.46 S_Transcript_1712:515-1210(+)
ATGGCGAGGAGAGAGAGAAATTTTATCAGCCAAGTCTTTGATCCTAGCAGTGAGTTTATTGTTCGTTGGAACAGGCTGATATTTGTGGTAGGCCTGATAAATTTCGTCCTAGATCCCATGTTCTTTTATCTTCCAACAGTCAGCGATTCCGACACTGTCTTTAAAGTGGATCTCCAATTAGGAGCAATCATTGCTACGCTACGATTGGTTGGAGATTCTATTCTTCTATTAGGTATTATCGTGAAGTTTTGCACGGCTTATGAAGCTCCAGGTCCAAGAGTTTTCAAAAGGAGAAGGCTGATTAAAGACGCTCGAGATGTTGTCACCAAATATTTGAGGTCTACGTTCATGGTCGATCTCTTCGCAGCATTACCACTGCCACAGGCTTATGTGTGGTATCAGATTTTGGCATCAGAAACTAAATCAAGAGCTCTCAAGGCAGATATCAGTATCTATTATGACCTAAGTGTCATCTTCTGGATTCAGCTTCTTCCTAGGCTGTTTGTTTTGGTCTGTTCAAAAACAGAAATCACCAAAACGGCTGGTATTCTGACAAGGAGTGCCATGTCTGGTGCCTTCTATAACCTCGTTTCATTTATTATTCTCAGCAATGTGAGCAACATCCTGGCATACAATCCTTTTATTTCTGCCATGTCAAGAGGGTTATATGTCATAGTATGCTTTGTACCAAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_1712.p1 GENE.S_Transcript_1712~~S_Transcript_1712.p1 ORF type:complete len:232 (+),score=16.46 S_Transcript_1712:515-1210(+)
MARRERNFISQVFDPSSEFIVRWNRLIFVVGLINFVLDPMFFYLPTVSDSDTVFKVDLQLGAIIATLRLVGDSILLLGIIVKFCTAYEAPGPRVFKRRRLIKDARDVVTKYLRSTFMVDLFAALPLPQAYVWYQILASETKSRALKADISIYYDLSVIFWIQLLPRLFVLVCSKTEITKTAGILTRSAMSGAFYNLVSFIILSNVSNILAYNPFISAMSRGLYVIVCFVPS*

Click here to download the sequence:
Link to NCBI Protein BLAST