Transcript Information: S_Transcript_171212.p1


Annotated TAIR IDAT5G60860.1
Annotated Gene NameRAB GTPase Homolog A1F
Annotated Gene Symbol(s)AtRABA1f, RABA1f
Annotation TypeOrtholog
Chromosome Positionchr5:24484750-24485565 | Forward length=217
E-Value8E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.407318918786
Replicate 29.8604646067105
Replicate 39.9941083804986
Condition 2: 8 Hour
Replicate 110.960535805454
Replicate 211.998309884993
Replicate 312.384626541442
Condition 3: 24 Hour
Replicate 111.105499428179
Replicate 28.2298757120814
Replicate 38.7361271123866


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171212.p1 GENE.S_Transcript_171212~~S_Transcript_171212.p1 ORF type:5prime_partial len:179 (+),score=33.64,Ras|PF00071.18|1.8e-48,Roc|PF08477.9|3.3e-22,Arf|PF00025.17|5.7e-08 S_Transcript_171212:3-539(+)
AGCCTTGAATCCAAGTCTACTATTGGCGTTGAATTCGCTACTCGTAGTATTCATGTTGATGATAAGATTGTTAAGGCTCAGATCTGGGATACTGCTGGTCAAGAAAGGTACCGTGCTATCACTAGTGCATACTATCGAGGAGCTGTCGGCGCACTACTAGTCTATGATGTTACAAGACATGTCACTTTTGAGAATATTGAGAGATGGTTGAAAGAACTTCGTGATCACACGGAACCCAGCATTGTGATAATGCTTGTGGGAAACAAAGCTGATCTGCGGCACTTGCGTGCGGTTTCAACCGAGGATGCTAAAGCCTTTGCAGAGAGAGAGGGCCTGTTTTTCATGGAGACATCTGCCCTTGAATCATTGAATGTTGAAAATTCATTTACTGAAGTCCTTACCCAAGTACATCATGTGGTAAGCCGGAAACAACTTGATATTGGGGGCGATCCGACTGCCTTGCCAAAGGGAGAAACAATCAATGTAGGAAAAGACGATGTGTCTGCTGTAAAGAAGGTTGGGTGCTGTTCTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171212.p1 GENE.S_Transcript_171212~~S_Transcript_171212.p1 ORF type:5prime_partial len:179 (+),score=33.64,Ras|PF00071.18|1.8e-48,Roc|PF08477.9|3.3e-22,Arf|PF00025.17|5.7e-08 S_Transcript_171212:3-539(+)
SLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENIERWLKELRDHTEPSIVIMLVGNKADLRHLRAVSTEDAKAFAEREGLFFMETSALESLNVENSFTEVLTQVHHVVSRKQLDIGGDPTALPKGETINVGKDDVSAVKKVGCCSA*

Click here to download the sequence:
Link to NCBI Protein BLAST