Transcript Information: S_Transcript_171395.p1


Annotated TAIR IDAT1G12020.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4062625-4063305 | Reverse length=226
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.746154901864
Replicate 219.611368495569
Replicate 321.437710319399
Condition 2: 8 Hour
Replicate 123.33034154353
Replicate 217.400326719787
Replicate 316.032432386653
Condition 3: 24 Hour
Replicate 123.338550737814
Replicate 222.470103785097
Replicate 319.617145648424


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171395.p1 GENE.S_Transcript_171395~~S_Transcript_171395.p1 ORF type:5prime_partial len:117 (-),score=40.44 S_Transcript_171395:276-626(-)
TCTCCAAATCGCCAGCTTATTCATGAGATTATTGATGTTTTTGAAGATGGGTTGCTAGCTCATAGGAACAAGAACAAGAAGAAACAGGGGATGAGCAGAAAAGAGAAGAGAAAGAACAACAGCAAAGGTTTGAATTTGGATGTCAATAATGGTAGGGTTGGGTTTAATGGTGATGATAGTGGATCTGGTGAGTTGGACAGAGTTAATACTGAGTTGGGTCGGTCTGACTCGGTTGAAAAAAGTGGTGAGGAACTCAGTTATGGGGATGATGAAACAGGGGAGAAACAGGGGTCTGTTAGGAAGTTTGTGACTTTCATTGGTGAAAGGATTTGGGGTTCTGTTTGGGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171395.p1 GENE.S_Transcript_171395~~S_Transcript_171395.p1 ORF type:5prime_partial len:117 (-),score=40.44 S_Transcript_171395:276-626(-)
SPNRQLIHEIIDVFEDGLLAHRNKNKKKQGMSRKEKRKNNSKGLNLDVNNGRVGFNGDDSGSGELDRVNTELGRSDSVEKSGEELSYGDDETGEKQGSVRKFVTFIGERIWGSVWG*

Click here to download the sequence:
Link to NCBI Protein BLAST