Transcript Information: S_Transcript_171453.p1


Annotated TAIR IDAT5G62950.1
Annotated Gene NameRNA polymerase II, Rpb4, core protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25262355-25263033 | Reverse length=139
E-Value4.4E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0961066195026
Replicate 22.5035789568811
Replicate 32.8775900272285
Condition 2: 8 Hour
Replicate 14.3860731857933
Replicate 22.5386494910328
Replicate 33.3258769312737
Condition 3: 24 Hour
Replicate 13.5633497892459
Replicate 24.018406307863
Replicate 32.6831962133102


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171453.p1 GENE.S_Transcript_171453~~S_Transcript_171453.p1 ORF type:complete len:141 (-),score=29.66,RNA_pol_Rpb4|PF03874.12|5.8e-22 S_Transcript_171453:36-458(-)
ATGAAAATTGTGAAAGCCAATGCTGGTCCCCTGACTAATTTCGAAGTGCTTGATTTCTTACGATCTAGAGGGGCATCAACGGATAATAATACCCGAGTCATGTCTCCTGTATTGGATTCTGAGTTCAAGGTATTTGATTATTTGGTTAAAGGCCCTGCTTGTAATCAGACCAGAGAAAGTATAAATGAATTTGTTGAGAAATCGAAAGAGTACCAGTTAGCAAAAGCTGAGATTATGAGCATCATCAACATCAGGCCCACTTCTGCAGTTGAACTTACAACGATGATAGAGGAATGGGATAAGCGTATGGAAGACAGAATCGAACAACTGGCAGAGATGATAGATCAAGTTTTGCCACCCCTGCCGAACTCAGATCAGGAAGCTGCTGCAGATGATTCTGCAGAGGGAGCACAAGAGGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171453.p1 GENE.S_Transcript_171453~~S_Transcript_171453.p1 ORF type:complete len:141 (-),score=29.66,RNA_pol_Rpb4|PF03874.12|5.8e-22 S_Transcript_171453:36-458(-)
MKIVKANAGPLTNFEVLDFLRSRGASTDNNTRVMSPVLDSEFKVFDYLVKGPACNQTRESINEFVEKSKEYQLAKAEIMSIINIRPTSAVELTTMIEEWDKRMEDRIEQLAEMIDQVLPPLPNSDQEAAADDSAEGAQEE*

Click here to download the sequence:
Link to NCBI Protein BLAST