Transcript Information: S_Transcript_171472.p1


Annotated TAIR IDAT1G04080.3
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)PRP39
Annotation TypeHomolog
Chromosome Positionchr1:1051803-1056550 | Forward length=823
E-Value6E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.015117392388
Replicate 212.078169465793
Replicate 310.904099436289
Condition 2: 8 Hour
Replicate 116.032957683684
Replicate 214.206940377053
Replicate 314.62547207933
Condition 3: 24 Hour
Replicate 118.336945995754
Replicate 215.219493905284
Replicate 311.782560889981


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171472.p1 GENE.S_Transcript_171472~~S_Transcript_171472.p1 ORF type:5prime_partial len:137 (-),score=10.42 S_Transcript_171472:606-1016(-)
TCGGATGCAGACGGCCAAGTACCTGAAAAGGAGGTTAACTCTGATGCGATGAACGAATCGTCTAACTCTGTAGGTACTGGTTTGTCAGAAGCAGAAGAGTTGGAGAAGTATATCGCCGTTAGAGAAGAGATGTATACGAGAGCTAAGGAGTTCGAATCTAAGATCAGTGGTTTTGAAACAGCTATTAGACGGCCATACTTCCACGTACGGCCCTTGAATGACTCAGAGCTAGAAAATTGGCATAGCTACCTGGATTTCATTGAAAGCGACGGGGACTTCAACAAGGTACCTGAATCTGTTTCACTTGATCAAATCTCAATTCTGAAGTTTACTAGATCTTTAGTGTCCTCCTTGTTATATATTGACTTACAGTTAAGTAAAATCTGCTGCACCGTATGCATTTTTGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171472.p1 GENE.S_Transcript_171472~~S_Transcript_171472.p1 ORF type:5prime_partial len:137 (-),score=10.42 S_Transcript_171472:606-1016(-)
SDADGQVPEKEVNSDAMNESSNSVGTGLSEAEELEKYIAVREEMYTRAKEFESKISGFETAIRRPYFHVRPLNDSELENWHSYLDFIESDGDFNKVPESVSLDQISILKFTRSLVSSLLYIDLQLSKICCTVCIFG*

Click here to download the sequence:
Link to NCBI Protein BLAST