Transcript Information: S_Transcript_171557.p2


Annotated TAIR IDAT4G16144.1
Annotated Gene Nameassociated molecule with the SH3 domain of STAM 3
Annotated Gene Symbol(s)AMSH3
Annotation TypeHomolog
Chromosome Positionchr4:9138053-9141422 | Reverse length=507
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.2081395241275
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171557.p2 GENE.S_Transcript_171557~~S_Transcript_171557.p2 ORF type:3prime_partial len:106 (-),score=1.92 S_Transcript_171557:2-316(-)
ATGAGTGGCAATAATAGAATACAGTACCTAGAAAGACACCTGAATCTTAGTAGCAGGGACTTGACTGATAGTCTTGCAAGAATTTGCAGTTTATTCTTCTTTGTGGTCTTACTTGCGGTTTGGACTCCAGGACGGCAAATCAAACCCACCTGTAGAGCGCATAAATGTAAGAGAATAAGTGCTTTGGAACAATCAGCGCTTGATTGTGAAGTACCCGGTTTTTCATTGAGCCTGCAAAAAGTCCACAGGTTTCCGATTTTTTGCTGCATTTTGTTGAGCCAGTCCCAGGAAATCTTCCAATTATTTTCAACAGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171557.p2 GENE.S_Transcript_171557~~S_Transcript_171557.p2 ORF type:3prime_partial len:106 (-),score=1.92 S_Transcript_171557:2-316(-)
MSGNNRIQYLERHLNLSSRDLTDSLARICSLFFFVVLLAVWTPGRQIKPTCRAHKCKRISALEQSALDCEVPGFSLSLQKVHRFPIFCCILLSQSQEIFQLFSTE

Click here to download the sequence:
Link to NCBI Protein BLAST