Transcript Information: S_Transcript_171676.p1


Annotated TAIR IDAT1G55150.1
Annotated Gene NameDEA(D/H)-box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20574634-20577141 | Forward length=501
E-Value1.4E-296
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.11228247594
Replicate 220.064977904669
Replicate 320.693621196166
Condition 2: 8 Hour
Replicate 122.374868187071
Replicate 222.944356577357
Replicate 322.322895523327
Condition 3: 24 Hour
Replicate 121.500869577357
Replicate 218.916252181833
Replicate 321.051470133404


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171676.p1 GENE.S_Transcript_171676~~S_Transcript_171676.p1 ORF type:5prime_partial len:508 (+),score=102.27,DEAD|PF00270.25|2.1e-49,Helicase_C|PF00271.27|8.6e+03,Helicase_C|PF00271.27|7.2e+03,Helicase_C|PF00271.27|1.4e-29,ResIII|PF04851.11|6.4e-06 S_Transcript_171676:2-1525(+)
CCTCCTACCGCGACCGCCGCAGGTCTCCTTCTCGCTCTCCATTTCAATTCTCTCGTCACCTTTCTCGAAACTAATTCTTCAATTCTTGGTTGCAGTGACTACGGCACTTCCGCCGGTGAATACACCGCCGCCGGAAAGAGGGACAACTCACCCCATCGGAAACTCGATTTGGACGGCTTGACTCCCTTTGAGAAGAATTTCTACGTCGAGTCTCCTTCTGTTGCCGCCTTAACTGAACGAGACGTTGAGGATTATCGTAAAGCCCGAGAAATCACCGTCGAAGGTCGTGATGTTCCTAAGCCTGTCAAGTCATTCCACGACGTCGGCTTTCCAGATTATGTCATAGAAGAGATTAGGAAGGCTGGCTTCGTTGAGCCTACAGCTATTCAAGCTCAAGGATGGCCAATGGCTTTGAAGGGTCGTGATCTCATTGGTATCGCAGAAACAGGATCAGGGAAAACACTTGCTTATTTGCTACCTGCCATCGTTCATGTCAATGCGCAGCCAATTTTGTCACCTGGTGATGGTCCTATTGTATTAGTTCTGGCTCCAACTAGGGAACTTGCTGTACAGATACAACAAGAATCAGCTAAATTTGGTGCTTCATCAAGGATTAAAAATACCTGCATATATGGTGGGGTTCCTAAGGGACCTCAAGTTCGTGATCTCCAGAAAGGTGTCGAAATAGTGATTGCAACACCAGGAAGGCTGATTGATATGTTGGAATCCAACCACACAAATCTGCGTAGGGTAACCTATCTTGTGTTGGATGAGGCAGATCGGATGCTGGACATGGGTTTTGAACCTCAAATACGCAAAATTGTGAATCAAATTCGGCCAGACCGTCAAACTCTTTACTGGAGTGCCACATGGCCTAAGGAGGTTGAGCAGCTTGCTAGGCAGTTTTTGTTCAACCCATATAAGGTGATTATTGGTTCTGCAGACCTGAAGGCTAATCATGCTATTCGTCAGATTGTGGACATTGTTTCTGAGAATCAGAAGTATAAGAAATTGGTGGATCTGCTGGAAGATATCATGGATGGGAGCCGGATTTTGATATTTATGGACACTAAGAAGGGGTGTGATCAGACTACGAGGCAGCTCCGCATGGATGGTTGGCCCGCTTTATCAATTCATGGGGATAAGAGCCAAGCAGAAAGAGATTGGGTTCTCTCAGAGTTCAAATCTGGCAAAAGTCCCATTATGACTGCTACAGATGTTGCAGCCCGTGGTCTAGATGTCAAAGATGTGAAATATGTGATAAACTATGACTTTCCTGGGTCACTTGAAGACTATGTTCACCGCATTGGTAGAACAGGACGGGCTGGTGCCAAAGGAACAGCTTATACATTTTTCACAGCTGCAAATGCCAGGTTTGCAAAGGAACTTATTGCCATCCTTGAGGAAGCTGGCCAGAAGGTTAGTCCTGAGCTGGCAGCTATGGGCAGAGGTGCTCCACCCCCATTGGCTGGTGGTTACCCAGAGCGGAGGAGCCGTTACAGCACTGGTCGGTCATGGAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171676.p1 GENE.S_Transcript_171676~~S_Transcript_171676.p1 ORF type:5prime_partial len:508 (+),score=102.27,DEAD|PF00270.25|2.1e-49,Helicase_C|PF00271.27|8.6e+03,Helicase_C|PF00271.27|7.2e+03,Helicase_C|PF00271.27|1.4e-29,ResIII|PF04851.11|6.4e-06 S_Transcript_171676:2-1525(+)
PPTATAAGLLLALHFNSLVTFLETNSSILGCSDYGTSAGEYTAAGKRDNSPHRKLDLDGLTPFEKNFYVESPSVAALTERDVEDYRKAREITVEGRDVPKPVKSFHDVGFPDYVIEEIRKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQESAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVEQLARQFLFNPYKVIIGSADLKANHAIRQIVDIVSENQKYKKLVDLLEDIMDGSRILIFMDTKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPLAGGYPERRSRYSTGRSWS*

Click here to download the sequence:
Link to NCBI Protein BLAST