Transcript Information: S_Transcript_171770.p1


Annotated TAIR IDAT5G28460.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10374927-10377227 | Forward length=766
E-Value6E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39136766522324
Replicate 20.48667918141577
Replicate 30.54243341422355
Condition 2: 8 Hour
Replicate 10.47041302170146
Replicate 20
Replicate 30.31346834713208
Condition 3: 24 Hour
Replicate 11.1243690031923
Replicate 20.66658269342198
Replicate 30.55636862658344


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171770.p1 GENE.S_Transcript_171770~~S_Transcript_171770.p1 ORF type:internal len:136 (+),score=17.29,PPR_2|PF13041.2|6e-07,PPR_2|PF13041.2|9.9e-08,PPR_2|PF13041.2|1.5e-08,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|8.1e-06,PPR_1|PF12854.3|36,PPR_1|PF12854.3|39,PPR_3|PF13812.2|0.00083,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.036,PPR|PF01535.16|0.19,PPR|PF01535.16|0.00047,PPR|PF01535.16|16 S_Transcript_171770:3-407(+)
TATTTTAAGAATACAGGAGTGTTCCCTGATGCTTTTACATATAATATTCTAGTACATGCAGCCTTAAGGGCTAAAGAATATGCGCTGGTTGAGGAATTATTGACAGATATGCGCTGCCAGAGGTTGGAACCAGATACTATCATTTATGGATGTTTTATCAGTGCAAAATGTGAAAATGGATGTATAAAAGATGCCCTTAAGCTGTGTCGCCAAATGCTTGCTAATGGAATCAGGCCGTCAGTTAATATTTACAATCATATATTGAGGGCAATGCTTCAAAGAATGATGTTTTGGGCCTTTCTCTTGCTAATAGAAGATATGGAAAGAAATGGTGTTCAACCTAATGACTCATCATATTCAATTCTGAAGCAAGCAATCTCAGAGAGTACCAAGAAGAAGTACGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171770.p1 GENE.S_Transcript_171770~~S_Transcript_171770.p1 ORF type:internal len:136 (+),score=17.29,PPR_2|PF13041.2|6e-07,PPR_2|PF13041.2|9.9e-08,PPR_2|PF13041.2|1.5e-08,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|8.1e-06,PPR_1|PF12854.3|36,PPR_1|PF12854.3|39,PPR_3|PF13812.2|0.00083,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.036,PPR|PF01535.16|0.19,PPR|PF01535.16|0.00047,PPR|PF01535.16|16 S_Transcript_171770:3-407(+)
YFKNTGVFPDAFTYNILVHAALRAKEYALVEELLTDMRCQRLEPDTIIYGCFISAKCENGCIKDALKLCRQMLANGIRPSVNIYNHILRAMLQRMMFWAFLLLIEDMERNGVQPNDSSYSILKQAISESTKKKYA

Click here to download the sequence:
Link to NCBI Protein BLAST