Transcript Information: S_Transcript_171775.p1


Annotated TAIR IDAT1G09900.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3218133-3219929 | Forward length=598
E-Value2E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36356559064454
Replicate 20.54252761207004
Replicate 30.55428988229401
Condition 2: 8 Hour
Replicate 11.0487896877278
Replicate 20.67237796458195
Replicate 31.0483203740155
Condition 3: 24 Hour
Replicate 11.0743385323243
Replicate 20.55730684204133
Replicate 30.89586496520904


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171775.p1 GENE.S_Transcript_171775~~S_Transcript_171775.p1 ORF type:3prime_partial len:366 (-),score=51.30,PPR_2|PF13041.2|8.7e-10,PPR_2|PF13041.2|5.6e-05,PPR_2|PF13041.2|7.7e-11,PPR_2|PF13041.2|1.8e-05,PPR_2|PF13041.2|2e-05,PPR_2|PF13041.2|3.9e-10,PPR_2|PF13041.2|2.1e-10,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|6e-07,PPR_1|PF12854.3|0.0025,PPR_1|PF12854.3|0.081,PPR_1|PF12854.3|7.4e+03,PPR_1|PF12854.3|5.3e+02,PPR_1|PF12854.3|2.9e-10,PPR_1|PF12854.3|0.0075,PPR_1|PF12854.3|0.092,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|8e-07,PPR_1|PF12854.3|3.6e+03,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.8,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|5.4,PPR_3|PF13812.2|0.031,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|4e-05,PPR_3|PF13812.2|0.23,PPR|PF01535.16|0.11,PPR|PF01535.16|3.4,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|5,PPR|PF01535.16|0.0021,PPR|PF01535.16|0.025,PPR|PF01535.16|0.017,PPR|PF01535.16|35,PPR|PF01535.16|0.5,PPR|PF01535.16|0.00064 S_Transcript_171775:1-1029(-)
ATGGAGAGAACAAGTTGTGAACCGGATTTGGTGACATTTAATATTCTTCTCCGTGAACTCTCTCACCAGGACATGAGAGATGAAATTAGTGAGCTGATTTCTCTTATGGATCAGAAAGGGTTATCACCTGACTCGTATATGCTCACTGCCTTCGCTGGAGGCAAGTTAAAGAGAGGGAAACTAGGAGAGGTTAACAAATTGTTGCTTAATGCTATTACGTATGGGTACAATGTGGACATTGCCGTTTATAACATGTATTTGAACACATTATGTTTTGATCATGGATACGGAGAAGCATTATCTTTGATAGAGAGCATGATTCATAAAGGTTTTGCACCAAACACTATTTCTTACAACACAATATTGAAAGGATTGTGCTTGAAAGACAGAGTTGATGATGCATATGAGTTCCTAGAGAGATTGCAATGGTCCACGACTGGCCCTGATATAGTCTCCTACAACACAATTTTATCCAAGGCATGCAAACAGGGGAACCTGTTGATGATACAGAAGCTTATTGATTGCATGGAGTCTCATTCAGTGGAGCTTAATTTTGTAAGCATTACATGTTTGATTCAGTATTTCTGTAAAGTTGGTGAAATTTCAAAGTGCTTCAAATTGCTGGAGAACATGTTATGCACTGGTTCTACTCCTAATGTTGTGAATCTTAATACATTTCTCACTGGTCTTTGCAAGAGAAGTTTGCTTGGGCTGGCTTACAGAGTGTTTGCTTATTTTAAGAATACAGGAGTGTTCCCTGATGCTGTTACATATAATATTCTCGTACATGCAGCCTTAAGGGCTAAAGAATATGCGCTGGTTGAGGAATTATTGACAGATATGCGCTACCAGAGATTGGAACCAGATACTATTACTTATGGATGCTTTATTAGTGCAAAATGTGAAAATGGCTGTATAAAAGATGCCATTAAGCTGTGCCGCCAAATGCTTGCTAATGGAATCAGGCCATCAGCTAATATTTACAATCAGTCCATTTTCAATGGGGCCAAATGTTTTACTATATTTTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171775.p1 GENE.S_Transcript_171775~~S_Transcript_171775.p1 ORF type:3prime_partial len:366 (-),score=51.30,PPR_2|PF13041.2|8.7e-10,PPR_2|PF13041.2|5.6e-05,PPR_2|PF13041.2|7.7e-11,PPR_2|PF13041.2|1.8e-05,PPR_2|PF13041.2|2e-05,PPR_2|PF13041.2|3.9e-10,PPR_2|PF13041.2|2.1e-10,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|6e-07,PPR_1|PF12854.3|0.0025,PPR_1|PF12854.3|0.081,PPR_1|PF12854.3|7.4e+03,PPR_1|PF12854.3|5.3e+02,PPR_1|PF12854.3|2.9e-10,PPR_1|PF12854.3|0.0075,PPR_1|PF12854.3|0.092,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|8e-07,PPR_1|PF12854.3|3.6e+03,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.8,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|5.4,PPR_3|PF13812.2|0.031,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|4e-05,PPR_3|PF13812.2|0.23,PPR|PF01535.16|0.11,PPR|PF01535.16|3.4,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|5,PPR|PF01535.16|0.0021,PPR|PF01535.16|0.025,PPR|PF01535.16|0.017,PPR|PF01535.16|35,PPR|PF01535.16|0.5,PPR|PF01535.16|0.00064 S_Transcript_171775:1-1029(-)
MERTSCEPDLVTFNILLRELSHQDMRDEISELISLMDQKGLSPDSYMLTAFAGGKLKRGKLGEVNKLLLNAITYGYNVDIAVYNMYLNTLCFDHGYGEALSLIESMIHKGFAPNTISYNTILKGLCLKDRVDDAYEFLERLQWSTTGPDIVSYNTILSKACKQGNLLMIQKLIDCMESHSVELNFVSITCLIQYFCKVGEISKCFKLLENMLCTGSTPNVVNLNTFLTGLCKRSLLGLAYRVFAYFKNTGVFPDAVTYNILVHAALRAKEYALVEELLTDMRYQRLEPDTITYGCFISAKCENGCIKDAIKLCRQMLANGIRPSANIYNQSIFNGAKCFTIFL

Click here to download the sequence:
Link to NCBI Protein BLAST