Transcript Information: S_Transcript_171779.p1


Annotated TAIR IDAT3G53700.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)MEE40
Annotation TypeHomolog
Chromosome Positionchr3:19900303-19902567 | Forward length=754
E-Value7E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.506396296331
Replicate 21.248837144765
Replicate 30.69595230504153
Condition 2: 8 Hour
Replicate 12.0118292752012
Replicate 22.2512552090291
Replicate 32.9493625616955
Condition 3: 24 Hour
Replicate 10.82433522606016
Replicate 21.567936649936
Replicate 32.0621797312359


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171779.p1 GENE.S_Transcript_171779~~S_Transcript_171779.p1 ORF type:internal len:159 (+),score=9.91,PPR_2|PF13041.2|0.0088,PPR_2|PF13041.2|8e-05,PPR_2|PF13041.2|2.9e-14,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|2.4e+02,PPR_1|PF12854.3|2.7e-06,PPR_1|PF12854.3|0.00035,PPR|PF01535.16|0.037,PPR|PF01535.16|3.4,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|8.3e+02,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|1e+03 S_Transcript_171779:3-476(+)
AGTGGGTATACGCCCTCGTTTTGTTCTTTGTCGAAGTTGTTGAAGAGGTTGTTGAGTGTGGAGAATTTAGCTGATTCGAGATATGTAGTAGAGTTGATGTTTGTATTGAATTATTTGCCAACCGAATCTTCACTACATTTCTTGATTATGAAGCTTTGTAGAGTGGGTATGGTACATGAGGCATATAGTGTTTTGAGAGCTTTAATTAGCAGAGGAAAGTTTTGCTCGACACTTGTATACAATCCGATTTTGTGGGCTTTGTGTAAATGTAACAAGAGTGTTGTTGCATTGTCGTTTTTATATTCTTTGAACAAGAGGGGTTATTTACATAATGTGTGCTCGTATACCAGTTTAGTGTATGGGTTTAGTAAGGAGAAGATGTGGAGTGAAGCTTTTCAGGTTTTTAGTGAGATGGAAAGTGTTAGGTGTGAACCAAATGTGATAACATACACGGCGTTGGTAAAGTTTCTTTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171779.p1 GENE.S_Transcript_171779~~S_Transcript_171779.p1 ORF type:internal len:159 (+),score=9.91,PPR_2|PF13041.2|0.0088,PPR_2|PF13041.2|8e-05,PPR_2|PF13041.2|2.9e-14,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|2.4e+02,PPR_1|PF12854.3|2.7e-06,PPR_1|PF12854.3|0.00035,PPR|PF01535.16|0.037,PPR|PF01535.16|3.4,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|8.3e+02,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|1e+03 S_Transcript_171779:3-476(+)
SGYTPSFCSLSKLLKRLLSVENLADSRYVVELMFVLNYLPTESSLHFLIMKLCRVGMVHEAYSVLRALISRGKFCSTLVYNPILWALCKCNKSVVALSFLYSLNKRGYLHNVCSYTSLVYGFSKEKMWSEAFQVFSEMESVRCEPNVITYTALVKFLC

Click here to download the sequence:
Link to NCBI Protein BLAST