Transcript Information: S_Transcript_171819.p1


Annotated TAIR IDAT2G47580.1
Annotated Gene Namespliceosomal protein U1A
Annotated Gene Symbol(s)U1A
Annotation TypeOrtholog
Chromosome Positionchr2:19517229-19518686 | Forward length=250
E-Value2.3E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.617858407236
Replicate 212.991287252141
Replicate 313.574602701127
Condition 2: 8 Hour
Replicate 113.964341882793
Replicate 210.788454927787
Replicate 311.253036299076
Condition 3: 24 Hour
Replicate 19.4254573436574
Replicate 211.619517610209
Replicate 310.370485263017


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171819.p1 GENE.S_Transcript_171819~~S_Transcript_171819.p1 ORF type:internal len:197 (-),score=41.89,RRM_5|PF13893.2|4.2e-12,RRM_1|PF00076.18|2.6e-11 S_Transcript_171819:1-588(-)
GCCTTCTCTCCTCCGCTCACTCTCGCCTGTCCCTCCTCTCTCTCCCTCTCCCTCGCCCTCTCTCTCACTCCCCATGCTATGCTCGCAAAAAGAAAAGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGTCGTAGCAGAGAGTAGGAGCAAAAGGAGCAAAGTAACAATGGCGGAGGTGCCTAATCCTGGCAGTGATATTCCTCCTAATCAGACTATTTACATCAACAACCTCAACGAAAAGATTAAGCTCGACGAATTGAAGAAGTCGATAATGGCGGTATTTTCGCAATTCGGGAAGATAATAGAAGTGTTAGCATTCAAGACGTTGAAACACAAAGGCCAAGCTTGGGTTGTCTTTGATGACGTTTCTTCTGCTACCAATGCTCTTCGTCAAATGCAAGGCTTTCCTTTCTATGACAAGCCTATGAGAATACAATATGCAAAGACCAAGTCAGATGTAATTGCAAAAGCTGATGGTACTTTTGTTCCACGAGAAAAACGAAAGAAGCATGAAGAGAGAGGTAAGAAGCGGAAAGAGCAACAAGATCCAAATCTAGCAGCAGCGGGCGTGAATTATCCTGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171819.p1 GENE.S_Transcript_171819~~S_Transcript_171819.p1 ORF type:internal len:197 (-),score=41.89,RRM_5|PF13893.2|4.2e-12,RRM_1|PF00076.18|2.6e-11 S_Transcript_171819:1-588(-)
AFSPPLTLACPSSLSLSLALSLTPHAMLAKRKGEREREREREREVVAESRSKRSKVTMAEVPNPGSDIPPNQTIYINNLNEKIKLDELKKSIMAVFSQFGKIIEVLAFKTLKHKGQAWVVFDDVSSATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPREKRKKHEERGKKRKEQQDPNLAAAGVNYPG

Click here to download the sequence:
Link to NCBI Protein BLAST