Transcript Information: S_Transcript_171858.p1


Annotated TAIR IDAT4G01030.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:448336-450642 | Reverse length=768
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1986044868297
Replicate 20.32929536653007
Replicate 30.27526471766568
Condition 2: 8 Hour
Replicate 10.4774341115776
Replicate 20.50086228297895
Replicate 30.63629395835765
Condition 3: 24 Hour
Replicate 10.6520860743461
Replicate 20.33826584442309
Replicate 30.56467263593544


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171858.p1 GENE.S_Transcript_171858~~S_Transcript_171858.p1 ORF type:5prime_partial len:134 (+),score=14.52,PPR|PF01535.16|0.0017,PPR|PF01535.16|0.19 S_Transcript_171858:2-403(+)
GCAACATCTCTTATACAGATGTACATTAAGTCAGGTAGCCTAAGCAGTGCCTCTGATATTTTCTACAGGATGAAGAATAAGACAGTTGCCACTTGGAATTGCATGATTATGGGTTTCGCGGTTTATAGCCAGGGGAAAGAGGGGATTATTTTGTTTCACTCTGCCCTTGATACACTCAAAGATCCTAATGGTCTAATATTTTCGATATGGGTATATGATCCTGGAGGATGCGACATGGGCAAATCGGTGAGAAAAGTGCTTAATCAGCAGCCACTCAAGTTCTGGTCAAATGGAAGGGCAAATCAGTGGAAGACTCTACTTGGGAATTCTTCTATGATATACTGCAGAAGTGTCCTCATTTTAATCCTTGAGGACAGGATTTTTTGCAGGGGAAAGTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171858.p1 GENE.S_Transcript_171858~~S_Transcript_171858.p1 ORF type:5prime_partial len:134 (+),score=14.52,PPR|PF01535.16|0.0017,PPR|PF01535.16|0.19 S_Transcript_171858:2-403(+)
ATSLIQMYIKSGSLSSASDIFYRMKNKTVATWNCMIMGFAVYSQGKEGIILFHSALDTLKDPNGLIFSIWVYDPGGCDMGKSVRKVLNQQPLKFWSNGRANQWKTLLGNSSMIYCRSVLILILEDRIFCRGKS*

Click here to download the sequence:
Link to NCBI Protein BLAST